DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33230 and Setd4

DIOPT Version :9

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001107219.1 Gene:Setd4 / 245975 RGDID:619899 Length:439 Species:Rattus norvegicus


Alignment Length:454 Identity:119/454 - (26%)
Similarity:194/454 - (42%) Gaps:63/454 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GRTQR-RRHQRAKKSDENSGSLHDLYVHLHSVGWQNHTHLSAQYYEQ-----------TGRGLCS 54
            |||:| ||.:|:..|...:.|....::.|..  |     |..:.:|.           |||||.|
  Rat     6 GRTERVRRRRRSSGSRGVNESCRSEFIELRK--W-----LKERKFEDTGLLVPACFPGTGRGLMS 63

  Fly    55 KQKTFSPEDELIRLPIGCLISIATL--ESDGPFKSLFDEELFDKDSRISFQALIACYILYHKHLQ 117
            | .:......:|.||..||::..|:  .|.||:...:...       :|....:..:::..:|  
  Rat    64 K-ASLQEGQVIISLPESCLLTTDTVIRSSVGPYIKKWKPP-------VSPLLALCTFLVSERH-- 118

  Fly   118 ECTLGTHSSTYAAYLDTLPRCYSTPYFCSIPE-LQCLPESLLERTVAQNRQIRGYFEIIKNIVHK 181
               .|:| |.:.:|||.||:.|:.| .|..|| :..||..|..:...|..:::..|...::....
  Rat   119 ---AGSH-SLWKSYLDILPKSYTCP-VCLEPEVVDLLPGPLRAKAEEQRARVQDLFASSRDFFST 178

  Fly   182 CDCCGKSYGQEIWTLADFKWAYFSVNTRSVHLSSRFLKKQSNYFQPLISGDTNLALAPFLDLFNH 246
            ...........|::...|.||:.:||||:|:|.||   :|    :.|.|.....||||||||.||
  Rat   179 LQPLFAESVDSIFSYHAFLWAWCTVNTRAVYLKSR---RQ----ECLSSEPDTCALAPFLDLLNH 236

  Fly   247 SDQVEITAGIEGPDYVLTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLRENKHDYFEVS- 310
            |..|::.|..........:::.  |..:.:.:.||.||...|.:||.||||....|.|....|| 
  Rat   237 SPHVQVKAAFNEKTRCYEIRTA--SRCRKHQEAFICYGPHDNQRLLLEYGFVAFGNPHACVPVSG 299

  Fly   311 -LLDIEHMIKQNKELSTQTFHRNIFKFIREHNLNDQMFVHIDDGCSHNLRVVLHLIFKQQAYFPN 374
             :| ::::...:|::     |:.: ..:.:|.....:.... ||.|..|...|.|:..:...|.:
  Rat   300 EML-LKYLPPADKQV-----HKKL-SILEDHGFTGNLTFGW-DGPSWRLLTALKLLCLEAERFTS 356

  Fly   375 ILNQIAFGDAEQFQDVQPELSYLVEYKIKEYEI--FGGELDKLPKLTE--SGAVARSYLQECIR 434
             ..::..||.  ..|...:.|..|..||....|  ...||.|:..:.|  ...:::..|.|.:|
  Rat   357 -WKKVLIGDV--ISDRNEKASLGVAQKICSDFIAEIHSELRKVSDMKERKGSLISQLCLVEALR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 31/86 (36%)
Setd4NP_001107219.1 Rubis-subs-bind 316..424 CDD:286371 23/107 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352330
Domainoid 1 1.000 74 1.000 Domainoid score I8972
eggNOG 1 0.900 - - E1_KOG1337
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41173
Inparanoid 1 1.050 93 1.000 Inparanoid score I4987
OMA 1 1.010 - - QHG49443
OrthoDB 1 1.010 - - D1209399at2759
OrthoFinder 1 1.000 - - FOG0005857
OrthoInspector 1 1.000 - - oto98073
orthoMCL 1 0.900 - - OOG6_105100
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4855
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.670

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