DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33230 and setd6

DIOPT Version :9

Sequence 1:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001096520.1 Gene:setd6 / 100125156 XenbaseID:XB-GENE-998235 Length:454 Species:Xenopus tropicalis


Alignment Length:307 Identity:70/307 - (22%)
Similarity:107/307 - (34%) Gaps:96/307 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SKQKTFSPEDELIR-LPIGCLIS--------------IATLESDGPFKSLFDEELFDKD------ 97
            :|::....||.|.. ||:.|.::              |:|..:...:..|..|:|.|.:      
 Frog     5 AKKQKLQSEDHLQNDLPVSCFLAWCKKVGLELNPKVYISTEGTVSQYGMLAREDLSDGELLFSIP 69

  Fly    98 -SRISFQALIACYILYHKH---LQECT-----------LGTHSSTYAAYLDTLPRCYSTPYFCSI 147
             |.|..|.......|..|.   ||.|:           ..|.||::.|           |||...
 Frog    70 RSAILSQNTTRIRDLIEKEQDSLQSCSGWVPLLISLLYEATDSSSHWA-----------PYFGLW 123

  Fly   148 PELQ--CLPESLLERTVAQNRQIRGYFEII----KNIVHKCDC-------------CGKSYGQEI 193
            |||.  .:|....|....:..|..|..|.:    |||..:.:.             |...:..::
 Frog   124 PELDPPDMPMFWSEEEQTKLLQGTGILEAVHKDLKNIEKEYNSIVLPFIRRNPEKFCPMKHTLDL 188

  Fly   194 W-TLADFKWAYFSVNTRSVHLSSRFLKKQSNYFQPLISGD-TNLALAPFLDLFNHSDQ----VEI 252
            : .|..|..||            .|.:.|....:..|..| ....:.|..||.||..|    :|.
 Frog   189 YKRLVAFVMAY------------SFQEPQEEDEEEDIEKDILPPMMVPVADLLNHVAQHNAHLEF 241

  Fly   253 TAGIEGPD--YVLTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGF 297
            |     |:  .::|.||:...:     :||.:||.:.|::||..|||
 Frog   242 T-----PECLRMITTKSVCAGQ-----ELFNTYGQMANWQLLHMYGF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 24/76 (32%)
setd6NP_001096520.1 SET <225..265 CDD:307139 13/49 (27%)
Rubis-subs-bind 314..445 CDD:312693
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.