DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12038 and Dipk1c

DIOPT Version :9

Sequence 1:NP_995949.1 Gene:CG12038 / 2768997 FlyBaseID:FBgn0035179 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_574179.1 Gene:Dipk1c / 498891 RGDID:1559694 Length:409 Species:Rattus norvegicus


Alignment Length:434 Identity:97/434 - (22%)
Similarity:160/434 - (36%) Gaps:90/434 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RKIRFGMQRT-------------VLIAVLLAVGIFSYAFLNLKFCFKLMSHRSLNLMCQKFEKHE 58
            |..|:|..|.             ||.|.||   :.::..:..:.|....|.|.|..:|:.:....
  Rat    10 RVARYGRWRRGALLAFAAWTAGWVLAAALL---LRAHPSVLSERCTDEKSRRILAALCRDYRGGW 71

  Fly    59 YSGSLCEELCGSQSSFDNFQCPLNDMKTILFTAEKNGDLYAVKLARHNDDELSWTNNKGESIYPK 123
            .:|:|||:||.:...... :|...:....:..|:..|....:|..|           :..|.:|.
  Rat    72 LTGALCEDLCVAGELLYQ-RCLYYERGKKVLQAQWRGQTVVLKSKR-----------EAFSSFPP 124

  Fly   124 LEEFHE-------IVKLHIIL--------AYNVTLDDNMIRALVNQEIADDNSQQMVSFWRLFKD 173
            |....|       |.:..::|        ...:.|.:|.|..|..........|::.|.|.|.:.
  Rat   125 LNLLEEEAGPGAPIPEAELLLMVAGEVKNTLGLELPNNSIAPLWPARQGPGWRQELASAWSLLQQ 189

  Fly   174 NNYMMGKLFDEES--IFPAVLGSCGPYYATEGLEIVQSNPSIMQYLA--------------SNRV 222
            ..|:...|..:.|  |.| ||||||.:||.|             |||              :.:.
  Rat   190 EEYVYFSLLPDLSRHILP-VLGSCGHFYAVE-------------YLAAGSPHHKALFPLDDAGQA 240

  Fly   223 QRLKH-ALNIMEYIFRLDEMKPEPLKMCKMQVNRFGTASERRLKYQSAEHVYVESQLDKRLSRGV 286
            |.:.| ||:.::.:...|......|.:|.::...|....:..:.....:..:.|.::.:.|.:  
  Rat   241 QAISHIALSFLDMVSHFDSDFSHRLHLCDVKPENFAIKRDFTVVAIDVDMAFFEPKMREILEQ-- 303

  Fly   287 KCHAHQDCHFHSCRGLCDEEKQSCTHIQQNNNFQIFCEHILLGGGTFQPGLLSGVR---LSKALQ 348
            .|...:||:|..|...||.....|...:.|:|.|:.|:.|      ||....|..|   :|..||
  Rat   304 NCTGDEDCNFFDCFSKCDLRVNKCGARRVNSNLQVICDKI------FQHWFSSSHRSPAISPQLQ 362

  Fly   349 KLVKMCVQPPKEHQVP-GRQWAPNT----QLALRLYNELKQLHQ 387
            ..::..||....|..| |..|..::    :|...|...||:|.:
  Rat   363 LQLQQAVQECAHHGDPSGNSWTASSSVFWKLRWLLQATLKELQE 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12038NP_995949.1 PIP49_N 10..153 CDD:291537 34/170 (20%)
PIP49_C 167..357 CDD:289064 50/209 (24%)
Dipk1cXP_574179.1 PIP49_N 13..167 CDD:291537 33/168 (20%)
PIP49_C 183..373 CDD:289064 51/211 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354225
Domainoid 1 1.000 58 1.000 Domainoid score I10549
eggNOG 1 0.900 - - E1_28K8P
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5165
OMA 1 1.010 - - QHG49292
OrthoDB 1 1.010 - - D1035909at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto98144
orthoMCL 1 0.900 - - OOG6_109430
Panther 1 1.100 - - LDO PTHR21093
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.770

Return to query results.
Submit another query.