DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc68E and Rtn4

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_114019.2 Gene:Rtn4 / 83765 RGDID:620989 Length:1163 Species:Rattus norvegicus


Alignment Length:1177 Identity:233/1177 - (19%)
Similarity:389/1177 - (33%) Gaps:364/1177 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 ED-DTTVAIETTTEKPEDDTTVEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPE 468
            || |.:..:.::|:.|            |........:...:||.....|::        .::.|
  Rat     2 EDIDQSSLVSSSTDSP------------PRPPPAFKYQFVTEPEDEEDEEEE--------EDEEE 46

  Fly   469 DDTTVEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTAEDSTPIPEESTT 533
            ||..:|:...:..:           |....     :..|:......|..|.:::...|.|.....
  Rat    47 DDEDLEELEVLERK-----------PAAGL-----SAAAVPPAAAAPLLDFSSDSVPPAPRGPLP 95

  Fly   534 VAQDTTNDPEGSTTREDDT------TVAIETTTEKPEDDTTAEDSTPIPEESTTVAQETTYDP-- 590
            .|.....:.:.|..|....      ..|....::.||||.......|.|....:...|....|  
  Rat    96 AAPPAAPERQPSWERSPAAPAPSLPPAAAVLPSKLPEDDEPPARPPPPPPAGASPLAEPAAPPST 160

  Fly   591 --------EGSTTREDDTTVAIETTTEKREDDTTVEDSTPIPEESTTVAQDTTNDPEGSTT---R 644
                    .||.   |:|..|:...:|            |:...|.....|....| |:|.   :
  Rat   161 PAAPKRRGSGSV---DETLFALPAASE------------PVIPSSAEKIMDLMEQP-GNTVSSGQ 209

  Fly   645 EDDTTVAIETTTEKPEDDTTAEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPED 709
            ||..:|.:||....|       ..:|:   ||...:|..|....|.....:.|:          :
  Rat   210 EDFPSVLLETAASLP-------SLSPL---STVSFKEHGYLGNLSAVSSSEGTI----------E 254

  Fly   710 DTTVEDSTPIPEESTT------VAQ--ETTYDPEGSTTR---EDDTTVAIETTTE------KPED 757
            :|..|.|..:||.:|.      :|:  |..|...||:.:   :.::.:.:|.|.|      |.::
  Rat   255 ETLNEASKELPERATNPFVNRDLAEFSELEYSEMGSSFKGSPKGESAILVENTKEEVIVRSKDKE 319

  Fly   758 DTTAEDSTPIPEESTTVAQDTTNDPEG-------------STTRED--------------DT--- 792
            |.....:...|:||....:|....||.             :..||:              ||   
  Rat   320 DLVCSAALHSPQESPVGKEDRVVSPEKTMDIFNEMQMSVVAPVREEYADFKPFEQAWEVKDTYEG 384

  Fly   793 ---TVAIETTTEKREDDTTVEDSTPIPEETTTVGQETTYDPEGSTTREEDTTVAIETTTEKPEDD 854
               .:|.....|.:.|...:|||.    |..::|:    |.||   |.||  .:..:|.|..:|.
  Rat   385 SRDVLAARANVESKVDRKCLEDSL----EQKSLGK----DSEG---RNED--ASFPSTPEPVKDS 436

  Fly   855 ----------TTAEDST-----PIPEESTTVAQETTYDPEGSTTREDDTTVAMETTTEKREDDTT 904
                      |:|.:||     |:.|:.|:         |..|..:.......:..|||....|:
  Rat   437 SRAYITCASFTSATESTTANTFPLLEDHTS---------ENKTDEKKIEERKAQIITEKTSPKTS 492

  Fly   905 ------VEDSTPIPEESTTVAQDT---------TNDPEGST------------TREEDTTVAIET 942
                  |:||     |:..|..||         :|.|||.|            .....|.:|.||
  Rat   493 NPFLVAVQDS-----EADYVTTDTLSKVTEAAVSNMPEGLTPDLVQEACESELNEATGTKIAYET 552

  Fly   943 TTEKPEDDTTVEDS-------TPIPEETTTVGQETTYDPEGSTTREDDTTVAIDTTTEKPEDDTT 1000
            ..:..:....:::|       .|..||.     |.|..|           |..|...|.|.:.. 
  Rat   553 KVDLVQTSEAIQESLYPTAQLCPSFEEA-----EATPSP-----------VLPDIVMEAPLNSL- 600

  Fly  1001 VEDSTPIPEESTTVAQDTTNDPEGSTTREDDTTVAIDTTTEKPEDDTTVEDSTPIP-EESTTIAQ 1064
                  :|....:|.|.:.:..|.      ...::.|:...:||:        |.| ||:..:|.
  Rat   601 ------LPSAGASVVQPSVSPLEA------PPPLSYDSIKLEPEN--------PPPYEEAMNVAL 645

  Fly  1065 ETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEESTTVAQDTTNDPEGSTTREDD-T 1128
            :.....||               .::||........|..|..|  :|.|...:.:.||....| :
  Rat   646 KALGTKEG---------------IKEPESFNAAVQETEAPYIS--IACDLIKETKLSTEPSPDFS 693

  Fly  1129 TVAIDTTTEK--PEDDTTVEDSTPIPEESTTVAQDTTNDPEGSTTREEDTTVAIETTTEKPEDDT 1191
            ..:.....||  ||....||||:|..|.....:.|:.  ||...|:||...:..|:.||..|   
  Rat   694 NYSEIAKFEKSVPEHAELVEDSSPESEPVDLFSDDSI--PEVPQTQEEAVMLMKESLTEVSE--- 753

  Fly  1192 TV-----EDSTPIPEETTTVGQE--TTYDPEGSTTREDDTTVAIDTTTEKPEDDTTVEDSTPIPE 1249
            ||     |..:..|:|   :|:.  .::.|...:|: |..:..|.|.|:|.:....:|      |
  Rat   754 TVAQHKEERLSASPQE---LGKPYLESFQPNLHSTK-DAASNDIPTLTKKEKISLQME------E 808

  Fly  1250 ESTTVAQDTTNDPEGSTTREDDTTVAIDTTTEKPEDDTTVEDSTPIP--EESTTVAQDTTNDPEG 1312
            .:|.:..:            ||   .:.:..:|.::..|..||:||.  :|..|..         
  Rat   809 FNTAIYSN------------DD---LLSSKEDKIKESETFSDSSPIEIIDEFPTFV--------- 849

  Fly  1313 STTREDDTTVAIDTTTEKPEDDTTV------EDSTPIPEESTTIAQETTYDPEGSTTREDDTTVA 1371
             :.::|...:|.:.|..:..|.:.:      .||.|..|....::.:..|               
  Rat   850 -SAKDDSPKLAKEYTDLEVSDKSEIANIQSGADSLPCLELPCDLSFKNIY--------------- 898

  Fly  1372 IETTTEKPEDDTTVEDS-----TPIPEESTTVAQDTTNDPE---GSTTREEDTTVAIETTTEKPE 1428
                   |:|:..|.|.     :.:.:.|.:.:..:..:|:   ||..:.:..|...|   :|..
  Rat   899 -------PKDEVHVSDEFSENRSSVSKASISPSNVSALEPQTEMGSIVKSKSLTKEAE---KKLP 953

  Fly  1429 DDTTVED 1435
            .||..||
  Rat   954 SDTEKED 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696
ChtBD2 1626..1668 CDD:214696
ChtBD2 1688..1734 CDD:214696
Rtn4NP_114019.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..184 36/220 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..270 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..437 13/43 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..474 5/28 (18%)
Reticulon 976..1140 CDD:396837
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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