DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc68E and Impg1

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_076448.2 Gene:Impg1 / 66014 RGDID:620499 Length:797 Species:Rattus norvegicus


Alignment Length:579 Identity:120/579 - (20%)
Similarity:185/579 - (31%) Gaps:149/579 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1331 PEDDTTVEDSTPIPEESTTIA---QETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVE---DST 1389
            |.|||.:::.| |.:..|.||   .|....||.:...|..:...:|.:...|......|   ..:
  Rat   199 PPDDTDLKEVT-IKDIQTPIAIRRAELESKPEPTHVTEISSEEKVEFSISLPNHRFKAELTNSRS 262

  Fly  1390 PIPEESTTVAQ---------------------DTTNDPEGSTTREEDTTVAIE---TTTEKPEDD 1430
            |..:|....:|                     ....:.:||::.|.......:   ..::.||.|
  Rat   263 PYYQELVGQSQLQLQKIFKKLPGFGEIRVLGFRPKKEEDGSSSTEIQLMAIFKRDHAESKGPESD 327

  Fly  1431 TTVEDSTPIPEETTTVGQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEETT--- 1492
            ....||..|..|....|......||...|..|...:.|...   ..|...|..:.|..:|.|   
  Rat   328 LLSLDSNKIERERIHHGAIEDKQPEAYLTAADLKKLIIRLL---DGDQPLVGGTVPFSDEVTEPL 389

  Fly  1493 --TVAQETTYDPEGSTTRDDTTVAIETTTEKPEDDTTAEGSTPIPDTSTTVNQDTTTDESSTVVT 1555
              .|.|.....|....| :|.|::.|....:|..::.......:||:|.::   ..|..:|.|  
  Rat   390 FRPVTQSELPKPLTDVT-EDVTLSPELPFSEPRLESVDRDGPDLPDSSWSL---PVTASTSGV-- 448

  Fly  1556 TTNIPKESTTLGDSTLSPGENSTAGQVSTSTTLVYDTTSSPI--PSSSRSTTLE----PSSSSSP 1614
             .|:|    :...|..:..:.|:...::|..|....|.:.|.  .|:.|...||    |.|||..
  Rat   449 -GNLP----SFTPSIFALDDQSSPPLMATGPTAFIPTLTLPTLDYSTVRQWPLEVSHWPESSSDR 508

  Fly  1615 ETTTSS-----------------LPPLSCSTGYQYLPH-------PTNCHKYIHCSN------GH 1649
            |.||||                 |..::..:||...|.       |....:|:..|:      ||
  Rat   509 ELTTSSHDTIRDLDEMDVSDTPALSEIAELSGYDSAPDRFLEMTTPIPTLQYVTTSSETIAAKGH 573

  Fly  1650 ELIMECP---ANLYWDYHKFVCSGDSGVCYNDTENSNPE------------------------EK 1687
            ||::...   ||:.:.|..|   ..|.:.|...|....:                        ..
  Rat   574 ELVVFFSLRVANMPFSYDLF---NKSSLEYQALEQRFTDLLVPYLRSNLTGFKQLEILSFRNGSV 635

  Fly  1688 VCGPGVDFL-AHPTDCTMYLQCSNGVALERKCPDPLYWNPEIKSCDWSNKYCTNLR-ASQSISCA 1750
            :....|.|. |.|.:.|   |...||..:.:.......|.||:|      :..|:. |.|:..|.
  Rat   636 IVNSKVRFAKAVPYNLT---QAVRGVLEDLRSTAAQELNLEIES------FSLNIEPADQADPCK 691

  Fly  1751 AGMNFNVFQSDCSKYVKCFG---LRGVVMSCNSG-----------LYWNPVSQVCEKSR 1795
            .        .||.|:.:|..   .......|..|           |...|..:.||.|:
  Rat   692 F--------LDCGKFAQCIKNELTEEAECRCRQGHESHGTLEYQELNLCPPGKTCEASQ 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696 8/43 (19%)
ChtBD2 1626..1668 CDD:214696 14/57 (25%)
ChtBD2 1688..1734 CDD:214696 12/46 (26%)
Impg1NP_076448.2 SEA 245..>322 CDD:413344 8/76 (11%)
SEA 576..674 CDD:396113 16/103 (16%)
Heparin-and hyaluronan-binding. /evidence=ECO:0000250|UniProtKB:Q8JIR8 623..631 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 740..797 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.