DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc68E and CG10154

DIOPT Version :10

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_648646.2 Gene:CG10154 / 39509 FlyBaseID:FBgn0036361 Length:316 Species:Drosophila melanogaster


Alignment Length:270 Identity:66/270 - (24%)
Similarity:99/270 - (36%) Gaps:68/270 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1577 STAGQVSTSTTLVYDTTSSPIPSSSRSTTLEPSS-----SSSPETTTSSLPPLSCSTGY------ 1630
            :..|.|:....|.|....|.......:|..|..|     ..:|:...   |..||..||      
  Fly    56 NVCGNVADGVYLPYVGNCSKYIECENNTIKEVGSCLDLAKDNPDICD---PNKSCELGYDPVLQV 117

  Fly  1631 -------QYLP-----------HPTNCHKYIHCSNGHELIMECPANLYW-------DYHKFV-CS 1669
                   |.||           :...|.||:.|..|..::.:|...|.:       |:.::| | 
  Fly   118 CTYMEEVQCLPTCESFRLSSFCYDNTCTKYVLCYYGKPVLRQCHDGLQYNNATDRCDFPEYVDC- 181

  Fly  1670 GDSGVCYNDTENSNPEEKVCGPGVDFLAHPTDCTMYLQCSNGVALERKCPDPLYWNPEIKSCDWS 1734
                |..:.:....||:      :.:|.....|:.|..||||...|::|...|.:||..|.||::
  Fly   182 ----VANDCSATFQPED------IIYLGSKASCSKYYVCSNGHPWEQQCAPGLAYNPSCKCCDFA 236

  Fly  1735 -NKYC--------------TNLRASQSISC-AAGMNFNVFQSDCSKYVKCFGLRGVVMSCNSGLY 1783
             |..|              |.||.: .|.| ..|.:|...:|....|..|...|||.:.|..|||
  Fly   237 KNVNCTIDAVARNILPYSRTPLRRA-DIKCPLMGTHFFPHKSRRDAYYYCVEGRGVTLDCTPGLY 300

  Fly  1784 WNPVSQVCEK 1793
            ::|..:.|.:
  Fly   301 YDPKVEDCRR 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 rne <158..303 CDD:236766
MDN1 300..1293 CDD:444083
rne <1358..1503 CDD:236766
ChtBD2 1626..1668 CDD:214696 15/73 (21%)
ChtBD2 1688..1734 CDD:214696 15/45 (33%)
ChtBD2 <1761..1791 CDD:214696 10/29 (34%)
CG10154NP_648646.2 CBM_14 130..181 CDD:426342 9/50 (18%)
CBM_14 197..239 CDD:426342 15/41 (37%)
ChtBD2 263..311 CDD:214696 16/48 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.