DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc68E and Impg2

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_620788.2 Gene:Impg2 / 245919 RGDID:708358 Length:1241 Species:Rattus norvegicus


Alignment Length:1209 Identity:245/1209 - (20%)
Similarity:392/1209 - (32%) Gaps:340/1209 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   789 EDDTTVAIETTTEKREDDTTVEDSTPIPEETTTVGQETTYDPEGSTTREEDTTVAIETTTEKPED 853
            ||..|...|..|:..:.          .|....:.::.||..|..::..:|.....|.::..|..
  Rat   135 EDGVTSVFEMGTQFSQS----------VEHRHLIMEKLTYTKEAESSSCKDQACGPELSSPVPIG 189

  Fly   854 DTT----AEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAMETTTEKREDDTTVEDSTPIPEE 914
            :|:    |..|...|   ...::.:...|:.|.:.|      :|..||:           |.|..
  Rat   190 ETSTLAGAVSSASYP---GAASERSAASPQESISNE------IENVTEQ-----------PTPPA 234

  Fly   915 STTVAQ-----------DTTNDPEGSTTREEDTTVAIETTTEKPEDDTT---------VEDSTPI 959
            :..:|:           :...||..:..|     :.:|....:.|...|         |.|... 
  Rat   235 AEQIAEFSIQLLGKQYSEELRDPSSALYR-----LLVEEFISEVEKAFTGLPGYKGIHVLDFRS- 293

  Fly   960 PEETTT---VGQETTYDPEG-STTREDDTTVAIDTTTEKPEDDTTVE-DSTP------------I 1007
            |:|..:   |....|::.|. |.|..|    .|...:.|.|:...|| |..|            |
  Rat   294 PKENGSGIDVHYAVTFNGEAISNTTWD----LISLHSNKVENHGLVELDDKPTAVYTISNFRDYI 354

  Fly  1008 PE---ESTTVAQDTTN-DPEG-----------STTRE---DDTTVAIDTTTEKPEDDTTVEDSTP 1054
            .|   ::..:...:.| ||:.           ..|.|   :..:.::..||....|: |::....
  Rat   355 AETLHQNFLMGNSSLNPDPKSLQLINVRGVLLPQTEEIVWNTQSSSLQVTTSSILDN-TLQAEWL 418

  Fly  1055 IPEESTTIAQETTYDPEG-------STTRE---DDTTVAIETTTEKPEDDTTVEDSTP------- 1102
            ..:||.|....||..|.|       :|.||   :.|...|.:|.:.......|..|:|       
  Rat   419 SADESITTTTTTTISPFGFSSGPPSATGRELHSESTLGDIVSTPKLASPSKVVLSSSPEVLGGSS 483

  Fly  1103 IPEESTTVAQ---DTTNDPEGSTTREDDTTVAIDTTTEKPED---DTTVEDS--TPIPEESTTVA 1159
            :...|.|.|.   |....|||.|:   .:::..|..||:.||   |.....|  .|:|:|:....
  Rat   484 LTLHSVTPAVLQIDLPVAPEGRTS---GSSILEDDNTEESEDVSIDVLPSSSLIQPVPKETVPPM 545

  Fly  1160 QDT-----TNDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPI----PEETTTVGQETTYDP- 1214
            :|:     |:.|..:::..||....|.|.:......:.|.|...:    |:  |:|.:|..::. 
  Rat   546 EDSDMILLTSSPHLTSSVIEDLAKDITTPSGLDSLASRVSDKLEVSPWFPD--TSVEKEFIFESG 608

  Fly  1215 --EGSTTREDD-----TTVAIDTTTEKPEDDTTVEDSTPIPEESTTVAQ--DTTNDPEGSTTRED 1270
              .||....|.     :..:::.|||......:.|..|.:|.||.....  .|....|.|..|..
  Rat   609 LGSGSGKNVDVIDWPWSETSLEKTTEPLSKSWSEEQDTLLPTESIEKLHMYFTEQMIEPSAHRYG 673

  Fly  1271 DTTVAIDTTTEKPEDDTTVEDSTPIPEESTTVAQDTTNDPEGSTTREDDT-----------TVAI 1324
            |..:..      .|:::.|..:.|:..||.|......:....|...:.|:           |:|.
  Rat   674 DGPIYF------TEEESHVRSTIPVFAESATQPTSLISSKHTSDVPDIDSYSVTKAPFLLATIAN 732

  Fly  1325 DTTTEKPEDDTTV--------EDSTPIPEESTTIAQETTYDPEGSTTREDDTTVAIETTTEKPED 1381
            ..:|::.::..|:        |.|:|...:|..........|..:...|.||..|..::..|...
  Rat   733 TASTKETDEVNTLLKKGMVQTEPSSPKGLDSKISVARPDMQPVWTILPESDTVWARTSSLGKLSR 797

  Fly  1382 DTTVEDSTPIPEE----STTVAQDTTNDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEE 1442
            ||.|  |||...:    ..::.|.....|...:.:.||..:            ..|:|   |..|
  Rat   798 DTLV--STPESADRLWLKASMTQPAELPPSTHSIQLEDEVI------------MAVQD---ISLE 845

  Fly  1443 TTTVGQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIP-EETTTVAQETTYDPEGST 1506
            ...||.: .|.||  .|:|.:..|           |:.||..|.:. .|...|||.|   ..|..
  Rat   846 LDQVGTD-YYQPE--LTQEQNGKV-----------DSYVEMPTHVHYTEMPLVAQPT---KGGVL 893

  Fly  1507 TRDDTTVA------IETTTEKPEDDTTAEGSTP------------IP----DTSTTVNQDTTTDE 1549
            :|..|..|      :..|.....:|...:.|..            :|    :.|...|.:.....
  Rat   894 SRTQTAGALVVFFSLRVTNMLFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLSGFQNLEILNFR 958

  Fly  1550 SSTVVTTTNIP-KESTTLGDSTLSPGENSTAGQV-STSTTLVYDTTSSPIPSSSRSTTLEPSSSS 1612
            :.::|..:.:. .||       :.|..|:....: ....|..|.|.:..|  ...|..:|....:
  Rat   959 NGSIVVNSRVKFAES-------VPPNVNNAIYMILEDFCTTAYQTMNLDI--DKYSLDVESGDDA 1014

  Fly  1613 SP-------ETTTSSLPPLS------CSTGY---QYLPHPTNCH-KYIHCSN--------GHELI 1652
            :|       |.:...:.|.|      |..||   ..||..:.|. :...|.|        ||..|
  Rat  1015 NPCKFQACNEFSECLVNPWSGEAKCKCHPGYLSVDELPCQSVCDLQPDFCLNDGKCDVMPGHGAI 1079

  Fly  1653 MECPANLYWDYHKFVCSGDSGVCYNDTENSNPEEKVCGP---GVD----------------FLAH 1698
            ..|.....|.|....|                ||.|..|   |:.                ||| 
  Rat  1080 CRCRVGSNWWYRGQHC----------------EEFVSEPFVIGITIASVVSLLLVASAVVFFLA- 1127

  Fly  1699 PTDCTMYLQCSNGVALERKCPDPLYWNPEIKSCDWSNKYCTNLRASQSISCAAGMNFN-VFQS-- 1760
                 ..||..| |..||:.|                   ||.:.....|....|.:| .::|  
  Rat  1128 -----KMLQAQN-VRRERQRP-------------------TNRQPDSLSSVENAMKYNPAYESRL 1167

  Fly  1761 -DCSKYVKCFGLRGVVMSCN----SGLYWNPVSQVCEKS 1794
             .|.:|.|.:.......|.:    .||....:.|:.|.|
  Rat  1168 AGCEQYEKPYSQHPFYSSASEEVIGGLSREEIRQMYESS 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696 7/33 (21%)
ChtBD2 1626..1668 CDD:214696 14/53 (26%)
ChtBD2 1688..1734 CDD:214696 13/64 (20%)
Impg2NP_620788.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..234 8/44 (18%)
SEA 235..345 CDD:295333 24/119 (20%)
Hyaluronan-binding motif involved in chondroitin sulfate A-binding. /evidence=ECO:0000250 255..263 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 431..456 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..520 7/22 (32%)
SEA 895..1018 CDD:214554 21/131 (16%)
Hyaluronan-binding motif involved in chondroitin sulfate C-binding. /evidence=ECO:0000250 1083..1091 1/7 (14%)
Hyaluronan-binding motif involved in chondroitin sulfate A-and C-binding. /evidence=ECO:0000250 1128..1136 3/8 (38%)
Hyaluronan-binding motif involved in chondroitin sulfate C-binding. /evidence=ECO:0000250 1139..1145 3/24 (13%)
Hyaluronan-binding motif involved in chondroitin sulfate A-and C-binding motif. /evidence=ECO:0000250 1210..1218
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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