DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc68E and cbd-1

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:1399 Identity:281/1399 - (20%)
Similarity:437/1399 - (31%) Gaps:383/1399 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 DDTTVAIETTTEKREDDTTVEDSTPIPEESTTVAQD------TTND--------------PEGST 642
            :|..|.::.:.|.|.|:.|.||.||..|...|..||      .:|.              |: |.
 Worm    69 EDECVPVDESPECRVDENTEEDDTPYAEFDCTSKQDGIYSIGCSNQFISCVAGGAYMAKCPD-SL 132

  Fly   643 TREDDTTVAIETTTEKPEDDTTA----EDSTP-IPEESTTVAQETTYDPEGSTTREDDTTVAIET 702
            ...:.|....|:..|..:|.|||    ||... ..|.|..:|.:  |:.:.|..:.|    :|:.
 Worm   133 VFNERTQDCRESCDEVKQDTTTAPQVYEDGEEGYGEASGEIAGD--YERQPSNEQPD----SIDF 191

  Fly   703 TTEKPEDDTTVEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTAEDSTPI 767
            .....||....:....:....:.......|.|.|:....:..:...:.||:.|        :|.:
 Worm   192 DCNGLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTDDP--------TTTV 248

  Fly   768 PEESTTVAQDTTNDPEGSTTREDDTTVAIETTTEKREDDTTVEDSTPIPE--ETTTVGQETTYDP 830
            ...::|:.....:|.|.|:|...|   .|.|||            ||..:  ||||.|    :| 
 Worm   249 SYSTSTITTPQEDDSEYSSTTSAD---VISTTT------------TPSIDAIETTTTG----FD- 293

  Fly   831 EGSTTREEDTTVAIETTTEKPEDDTTAEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAMETT 895
                        |:.|||      ||   .||.      |.||...:..|..:...:........
 Worm   294 ------------AVTTTT------TT---QTPF------VCQEGQVNSFGMCSSRFNRCQNNSVR 331

  Fly   896 TEKREDDTTVEDST-----PIPE-ESTTV----AQDTTNDPEGSTTREEDTTVAIETTTEKPEDD 950
            :::...:|..|.|.     .:|: :..||    |.::...|..:.....|..|.:     ||:.|
 Worm   332 SKQCPVNTLFESSLVMCVFDLPQCQPITVPAAPAYNSYGPPSDTIVSPFDENVRL-----KPKFD 391

  Fly   951 TTVEDSTPIPEETTTVGQETTYDP------EGSTTREDDTTVAIDTTTEKPEDDTTVEDSTPIPE 1009
            ...:.....|......|.....:|      .|.:.| |..........:.| ..|.......:.:
 Worm   392 RRRKYHHGKPSYGPVNGNSYLENPFFIPRHRGGSHR-DHRRYGYGPAIDSP-FSTAFRGRAALSD 454

  Fly  1010 ESTTVAQDTTNDPEGSTTRED-DTTVAIDTTTEKPED---DTTVEDSTP----------IPEEST 1060
            :.....:......:|...:.| :....||...|.|..   ::.:|...|          ..|:..
 Worm   455 QFKDYRRARMGKIQGDARKVDGNKRFLIDDEFEGPNAKFVESNIEQVFPKNRHSKKQLGPHEDPD 519

  Fly  1061 TIAQETTYDPE---GSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEESTTVAQD--------- 1113
            ....|.|:|.:   |:|.|:.......|.:...       :.|..|......|.:|         
 Worm   520 GYDDEKTFDAKDLFGATRRKRSAYYGTEQSVYG-------QQSAQISARQAQVNKDCQQYTTPTF 577

  Fly  1114 -TTND-------------------PEG----STTREDDTTVAIDTTTEKPEDDTTVEDSTPIP-- 1152
             |..|                   |.|    .|.|....|..:.||.......|...|....|  
 Worm   578 LTFGDCFDQFIFCSGNGINRMAACPIGETFDKTLRSCSETCGVSTTIVAVTIGTQTSDDLSAPSE 642

  Fly  1153 --EESTTVAQDTTNDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEETT-------TVG- 1207
              |......|.|.|| :.|||:..::..:.  ||:...:|.....:.||.:..:       ::| 
 Worm   643 YIENDGVTTQSTWND-QPSTTQAPNSYESY--TTQYSSNDVPSTSAAPIGDRCSLDASGLFSLGC 704

  Fly  1208 ---------------------------QETTYDPE-------GSTTREDDTTVAIDTTTEK---P 1235
                                       ||.||..|       |||:....||...|.::..   |
 Worm   705 SQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIP 769

  Fly  1236 EDDTTVEDSTPIPEESTTVAQDTTN----------DPEGSTTREDDTTVAIDTTTEK-------- 1282
            .||......||:.:....||....:          ....::.||.:.::..|..::.        
 Worm   770 SDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVF 834

  Fly  1283 --PEDDTTVEDSTPIPEESTTVAQDTTNDPEGSTTREDDTTVAIDTTTEKPEDD-TTVEDSTP-- 1342
              ...|.:...:.|..:.:||.|..:.::|   ||.|......|.:.|..|.|. |::.|.|.  
 Worm   835 KCQTADVSSSSTVPYLDFTTTPASPSEDEP---TTYEPSVAPYIPSVTVNPVDTCTSLSDGTHGT 896

  Fly  1343 -------IPEESTTIAQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEESTTVAQ 1400
                   :......|:.......||    .|.:.....|.:|             ||..:.. .|
 Worm   897 GCSSFYFVCSHGRLISSGNCQLGEG----YDPSVQGCRTFSE-------------IPARACD-EQ 943

  Fly  1401 DTTND------------PEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVGQET-TY 1452
            :.|.|            .|..||.|..||||.:..|     ||.:..||..  .||..|:.| .|
 Worm   944 EVTTDAGLVQLMPYKTLEEVLTTTEAATTVANDGPT-----DTYITGSTKY--STTDSGEYTIPY 1001

  Fly  1453 DPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVAQETTYDPEGSTTRDDTTVAIET 1517
            ..|.::||..|..   :..:|..|:|....|      :..||...|   |.|...|    ..:|.
 Worm  1002 GDETTSTRSYDRA---DNDSEDEEEDDVEHD------QKCTVGSRT---PVGFCVR----TYLEC 1050

  Fly  1518 TTEKPEDDTTAEGSTPIPDTSTTVNQDTTTDESSTVVTTTNIPKESTTLGDSTLSPGENSTAGQV 1582
            |                              ::..|.....|.|    |.||    ..|....::
 Worm  1051 T------------------------------DAGNVEKLCRIGK----LFDS----HSNRCVPRI 1077

  Fly  1583 STSTTLVYDTTSSPIPSSSRSTTLEPSSSSSPETTTSSLPPLS------CSTGYQYLPHPTNCHK 1641
            ......:.|.....|     :||..|:.....|...:.:...:      ||:            |
 Worm  1078 GCGKEAIRDAIKDMI-----ATTPAPAQPKQFEGRCAHVDGEAVFSIGVCSS------------K 1125

  Fly  1642 YIHCSNGHELIMECPANLYWDYHKFVCSGDSGV--C-------YNDTENSNPEEKVCGPGVDFL- 1696
            |:.||.|...:.:|..:..:...|..|.....|  |       ......||.:...|....|.| 
 Worm  1126 YLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVPKNPSIKKYYTSNDQSAFCDGKEDGLY 1190

  Fly  1697 AHPTDCTMYLQCSNGVALER-KCPDPLYWNPEIKSCDWSNKY--CTNLRASQSISCAAGMNFNVF 1758
            .:..||:..|||..|...|. .|...|.:|.....||:..|.  |.| ....:..|:...:|...
 Worm  1191 RNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCEN-HGQTNGECSEHGSFIAD 1254

  Fly  1759 QSDCSKYVKCFGLRGVVMSCNSGLYWNPVSQVCE 1792
            .::|..:.:|...|.|||:|.||..:||:..||:
 Worm  1255 ANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCD 1288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696 11/29 (38%)
ChtBD2 1626..1668 CDD:214696 9/41 (22%)
ChtBD2 1688..1734 CDD:214696 15/47 (32%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696 7/44 (16%)
ChtBD2 191..237 CDD:214696 5/45 (11%)
CBM_14 692..743 CDD:307643 6/50 (12%)
CBM_14 785..836 CDD:307643 5/50 (10%)
CBM_14 1108..1161 CDD:307643 11/64 (17%)
CBM_14 1182..1235 CDD:307643 16/52 (31%)
CBM_14 1251..1296 CDD:307643 14/38 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.