DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc68E and R02F2.4

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:369 Identity:71/369 - (19%)
Similarity:129/369 - (34%) Gaps:104/369 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1447 GQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVAQETTY-DPEGSTTRDD 1510
            |:|..:..:||.....|                                :|.|: |..|.::.|:
 Worm    81 GEENEFSGDGSGESSGD--------------------------------EEITFGDSSGESSGDE 113

  Fly  1511 TTVAIETTTEKPEDDTTAEGSTPIPDTSTTVNQDTTTDESSTVVTTTNIPKESTTLGDSTLSPGE 1575
               .:|...|..:|...:.|                |..||.::..:..|:              
 Worm   114 ---LLENVCESLKDGVYSSG----------------TCSSSYIICNSGSPR-------------- 145

  Fly  1576 NSTAGQVSTSTTLVYDTTSSPIPSSSRSTTLEPSSSSSPETTTS--SLPPLSCSTGYQYLPHPTN 1638
                 .:|.||.|:||.|:.   ..|....::..|..|.|...|  ::....||           
 Worm   146 -----FLSCSTPLIYDPTNK---KCSWKGMIDECSQVSGEYCESDGNISKSECS----------- 191

  Fly  1639 CHKYIHCSNGHELIMECPANLYWDYHKFVCSGDSGVCYNDTENSNPEEKVCGPGVDFLAHPTDCT 1703
             :.:..||.|......|||||.::.....|.....|.....::..|:.  ||....:.:.....:
 Worm   192 -NVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQN--CGEVDGYFSFGRCSS 253

  Fly  1704 MYLQCSNGVALERKCPDPLYWNPEIKSCDW----------SNKYCTNLRASQSISCAAGMNFNVF 1758
            .:..|:||:.:...|||.|.::.:.:.||:          |:.:..|.:||::::....|:..::
 Worm   254 SFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLESSGFMENYKASEALTPCTNMDNGLY 318

  Fly  1759 QSDCS-KYVKCFGLRGVVMSCNSGLYWNPVSQVC---EKSRRFC 1798
            ..||: :.:.|...|..:..|...|.:|..|.:|   |.|.:.|
 Worm   319 ALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696 8/30 (27%)
ChtBD2 1626..1668 CDD:214696 10/41 (24%)
ChtBD2 1688..1734 CDD:214696 11/55 (20%)
R02F2.4NP_498171.1 CBM_14 25..74 CDD:279884
ChtBD2 117..165 CDD:214696 15/85 (18%)
CBM_14 185..229 CDD:279884 12/55 (22%)
ChtBD2 240..283 CDD:214696 9/42 (21%)
CBM_14 310..361 CDD:279884 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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