DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc68E and F35C5.3

DIOPT Version :9

Sequence 1:NP_996064.1 Gene:Muc68E / 2768990 FlyBaseID:FBgn0053265 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_496739.1 Gene:F35C5.3 / 174925 WormBaseID:WBGene00009391 Length:394 Species:Caenorhabditis elegans


Alignment Length:392 Identity:139/392 - (35%)
Similarity:180/392 - (45%) Gaps:79/392 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   654 TTTEKPED-DTTAEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPE-DDTTVEDS 716
            |.|:.|.. |||||   |.....||||||.|  .||:.|.|  |||..:||....| .:|||...
 Worm    64 TATDAPTTADTTAE---PTKAHETTVAQEAT--SEGAETHE--TTVGQDTTVRSGESQETTVSQG 121

  Fly   717 TPIPEESTTVAQETTYDPEGSTTREDDTTVAIETTTEKPEDDTTAEDSTPIPEES-----TTVAQ 776
            |.:.:|: ||:||||.        ..||||:.|||..:   |||....|.:.:||     |||:|
 Worm   122 TTVSQEN-TVSQETTV--------SQDTTVSQETTVSQ---DTTVSQDTTVSQESTVSQETTVSQ 174

  Fly   777 DTTNDPEGSTTRE----DDTTVAIETTTEKREDDTTVEDSTPIPEETTTVGQETTYDPEGSTTRE 837
            |||...|.|.:.|    .||||:.|:|..:   ||||...|.:.:| |||.||||.        .
 Worm   175 DTTVSQETSVSHETNVSPDTTVSQESTVSQ---DTTVSQETTLSQE-TTVSQETTV--------S 227

  Fly   838 EDTTVAIETTTEKPEDDTTAEDSTPIPEESTTVAQETTYDPEGSTTREDDTTVAMETTTEKREDD 902
            :||||:.|||..:   |||....|.:.:::|.|.||||.          :.|.|.|.|.|.....
 Worm   228 QDTTVSQETTASQ---DTTVSQDTTVSQDTTVVPQETTV----------EATKASEATEENGTTA 279

  Fly   903 TTVEDSTPIPEESTTVAQDTTNDPEGSTTREE----DTTVAIETTTEKPEDDTTVEDSTPIPEET 963
            .|..:|.|.         |||..|.|.:|..|    |||.|.|.|....:.:|..:.::......
 Worm   280 VTPGESDPC---------DTTEAPTGGSTVGESEPCDTTEASEPTGHTDQAETVTDPASQATASA 335

  Fly   964 TTVGQETTYDPEGSTTREDDTTVAIDTTTEKPEDDTTVEDSTPIPEESTTVAQDTTNDPEGSTTR 1028
            |.:|   ..|..|||..|..|.......|:..|::.|.|:.    :|.||.|....:.||    |
 Worm   336 TIIG---GVDQTGSTNLEATTEQICKHPTKDSEEEKTDENK----DEKTTRAGTNVHRPE----R 389

  Fly  1029 ED 1030
            ||
 Worm   390 ED 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc68ENP_996064.1 ChtBD2 <1761..1791 CDD:214696
ChtBD2 1626..1668 CDD:214696
ChtBD2 1688..1734 CDD:214696
F35C5.3NP_496739.1 rne <130..294 CDD:236766 75/208 (36%)
PRK11907 256..>354 CDD:237019 34/119 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto18502
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3552
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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