DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk5 and del-4

DIOPT Version :9

Sequence 1:NP_996138.2 Gene:ppk5 / 2768987 FlyBaseID:FBgn0053289 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:551 Identity:108/551 - (19%)
Similarity:186/551 - (33%) Gaps:183/551 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKYVISDNNYSW---------------WIKLYFAIIFALVLFVAVNLAVGIYNKWDSTPVI---- 49
            ||||.:|.: .|               |::.::      :|.|.|::|:.|   |....::    
 Worm     8 LKYVFTDFS-CWTSTHGVPHIGMANARWLRAFW------ILVVVVSIALFI---WQFITLLTNYL 62

  Fly    50 -IGISSKMT-PIDQIPFPTITVCNMNQAKKSKVEHLMP-------------GSIRYAM-LQKTCY 98
             ..::::.| ...:..|||:|:|::|..|.|:.:.:.|             .|.::.: ...|..
 Worm    63 SFSVNTETTLQFAERTFPTVTICHLNPWKLSETKSVDPDMSALIDAYNSDSSSAQFGLPASLTAD 127

  Fly    99 KESNFSQY--MDTQHRNETFSNFILDVSEKCADLIVSCIFHQQRIPCTDIFRETF-VDEGLCCIF 160
            ::...|::  |.::..||...|...|::....|::|||.::.:....|| |.:.: ...|.|..|
 Worm   128 RQQQASKWTLMYSERLNEKQYNDAADIAYSYDDMVVSCTYNAKTCNITD-FNDFYNPSYGNCLQF 191

  Fly   161 NVLHPYYLYKFKSPY-IRDFTSSDRFADIAVDWDPISG------------YPQRLPSSYYPRPGV 212
            |....|...:....| :|....:|:  |..:.|...||            ||...  .|:..|  
 Worm   192 NTDGMYSSSRAGPLYGLRMVMRTDQ--DTYLPWTEASGVIIDIHMQDEIPYPDVF--GYFAPP-- 250

  Fly   213 GVGTSMGLQIVLNGHVDDYFCSSTNGQGFKILLYNPIDQPRMKESGLPVMIGHQTSFRIIARNVE 277
            |..:|:|:..|....:...:.|.|.             :.::|.:       |.|.         
 Worm   251 GTASSLGVSYVQTTRLSKPYGSCTT-------------KTKLKTT-------HYTG--------- 286

  Fly   278 ATPSIRNIHRTKRQCIFSDEQELLFYRYYTRRNCEAECDSMFFLRLCSCIPYYLPLIYPNAS--- 339
                                       .||...|...|.....:..|.|   |.| .|.:||   
 Worm   287 ---------------------------TYTVEACFRSCMQEKIIASCGC---YYP-AYSHASNTT 320

  Fly   340 ---VCD-----VFHFEC---LNRAESQIFD-LQSSQCKEFC--------------------LTSC 372
               .||     :.:..|   :|.|:|..|| |....|.:.|                    .|.|
 Worm   321 QYVSCDNGVQTLSNLNCVDLINSADSTEFDVLTDCDCPQPCEIDSYGVTVSTAQWPSDSYVPTEC 385

  Fly   373 HDLIFFPDAFSTPFSQKDVKAQTNYLTN---FSSEYMRKNLAVVNFFHTDNYFRSSVRTSYTGPT 434
            :     |...|.|:..........|..|   ....|.|.|..|:    |::       .:||. .
 Worm   386 N-----PGGPSGPWDASGESCLDWYKANTILIEIYYERMNFQVL----TES-------PAYTF-V 433

  Fly   435 EYMASTGGIMSLMIGFSVIFLAEIIYIILFV 465
            .:::..||.:.|.:|.|:|...|.:.:|..|
 Worm   434 NFISDVGGQVGLFLGMSIISAIEYLVLIFLV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk5NP_996138.2 ASC 4..460 CDD:279230 106/544 (19%)
del-4NP_492230.2 ASC 8..466 CDD:295594 108/551 (20%)
deg-1 14..460 CDD:273309 102/539 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

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