DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and Zbtb42

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001119774.1 Gene:Zbtb42 / 691556 RGDID:1582758 Length:420 Species:Rattus norvegicus


Alignment Length:422 Identity:96/422 - (22%)
Similarity:145/422 - (34%) Gaps:105/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPC-KHPVVMLAG- 77
            ::|..|:..::..|..|.|.|||:..|...||||:.||.|.|.:.....::.|. ....|.|.| 
  Rat     5 EHGVRLLGRLRQQRELGFLCDCTVLVGDARFPAHRAVLAACSVYFHLFYRDQPASSRDTVRLNGD 69

  Fly    78 -VNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLA-----------PQTVTKDDYTTH 130
             |.......||:|:|.|.:.:....:..:|.||..|::..:.           |...|:...|..
  Rat    70 IVTVPAFSRLLDFMYEGRLDLHSLPVEDVLAAASYLHMYDIVKVCKGRLRKKDPDLETRTLGTEL 134

  Fly   131 SIQLQHMIPQHHDQDQLIATIATAPQQTVHA------------QVVEDIH--------------- 168
            ..|..|.:|............|..|...|.|            ||.|:..               
  Rat   135 PGQTPHPLPSWPPAFCQATPKAKPPSLGVKAVHPLPKFGPPSWQVSEESSGALDLSLKPGPRPEQ 199

  Fly   169 -HQGQILQATTQTNAAGQ-QQTIVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGM 231
             |...:|| |:|.::..| .|.:|     |.:|   .:|.......|:....||.....|...|:
  Rat   200 AHPPCLLQ-TSQCSSIQQGAQPLV-----KAEQ---DSFSEQDSSSPQSADRSPPPVCASAARGL 255

  Fly   232 DTIMGTPTSSHGSGSVQQVLGENGAEGQLLSSTPIIKSEGQKVETIVTMDPN----------NMI 286
             .:...|....|:||  |.||        |.:.|::.||        .:.|.          .:.
  Rat   256 -AVNLEPLHIQGTGS--QQLG--------LHAEPVVDSE--------DLGPGRHLCICPLCCKLF 301

  Fly   287 PVTSA------------NAATGEITPAQGATGSSGGNTSGVLSTPKAKRAKHPPGTEKPRSRSQS 339
            |.|.|            ::....::| :||          |.:.|...:......|.|...|:.|
  Rat   302 PSTHALQPHLSAHFRERDSVRTRLSP-EGA----------VPTCPLCSKTFSCTYTLKRHERTHS 355

  Fly   340 -EQPATCPICYAVIRQSRNLRRHLELRHFAKP 370
             |:|.||..|....:.|.||.||..:....||
  Rat   356 GEKPYTCVQCGKSFQYSHNLSRHAVVHTREKP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 29/92 (32%)
BTB 35..118 CDD:197585 26/85 (31%)
GAGA 319..372 CDD:150045 17/53 (32%)
Zbtb42NP_001119774.1 BTB_POZ_ZBTB42 1..129 CDD:349737 33/123 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..204 4/29 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..248 9/39 (23%)
C2H2 Zn finger 294..314 CDD:275368 3/19 (16%)
COG5048 334..>388 CDD:227381 17/54 (31%)
C2H2 Zn finger 334..354 CDD:275368 4/19 (21%)
zf-H2C2_2 347..369 CDD:404364 8/21 (38%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..408 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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