DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and Nacc2

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001032175.1 Gene:Nacc2 / 67991 MGIID:1915241 Length:586 Species:Mus musculus


Alignment Length:673 Identity:118/673 - (17%)
Similarity:205/673 - (30%) Gaps:226/673 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCK 69
            |:.:..:...::|.:::..:...|..|...|.::...|::|.||:.||.|:|.:..||.... .|
Mouse     1 MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGN-SK 64

  Fly    70 HPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHSIQL 134
            ....:...|.....:.:|.|.|.|:::         :.|::.|.:.           ||...:|:
Mouse    65 SAFELPGTVPPACFQQILSFCYTGKLT---------MAASEQLVVM-----------YTAGFLQI 109

  Fly   135 QHMIPQHHDQDQLIATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTTDAAKHDQ 199
            ||::.:..|   |:..:::.     |.                       ..||.:..||:...|
Mouse   110 QHIVERGTD---LMFKVSSP-----HC-----------------------DSQTAMIEDASSEPQ 143

  Fly   200 AVIQAFLPARKRKPRVKKMSPTAPKISKV--EGMDTIMGTPTSSHGSGSVQQVLGENGAEGQLLS 262
            :......||  ....|...|...|.:::|  |.|:.   .|.|..|                |.|
Mouse   144 SPCNQLQPA--TAAYVTSPSVPIPLLTRVKHEAMEM---PPASGPG----------------LAS 187

  Fly   263 STPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGATGSSGGNTSGVLSTPKAKRAKHP 327
            ..|:        ||    .|.:.:.|.:..|.|....|.:....|..|..|.....|..::..:|
Mouse   188 KRPL--------ET----GPRDGVAVATGAAGTPGTAPLKLPRVSYYGVPSLATLIPSIQQVPYP 240

  Fly   328 PG------------TEKPRS-------------------------------RSQSEQPATCPI-- 347
            ||            |:.|.|                               .:..|:|...|:  
Mouse   241 PGERTSPGASSLPTTDSPTSYHNEEDEEDDEAYDTMVEEQYGQMYIKATGNYAVQEKPEPVPLES 305

  Fly   348 --CYAVIRQSRNL----------RRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEMNTTA---- 396
              |..:.|....|          |.|.:|.....||.|.|..:.||...|....|..:..|    
Mouse   306 RSCVLIRRDLVALPASLISQIGYRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKH 370

  Fly   397 ------------EGDNTVGSDGAGGAGSAGG------------------QSSATSGKKSSSGSSG 431
                        :.:....|.|.|...|...                  |:.|.|.|:|......
Mouse   371 KVLLRRLLATFFDRNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIA 435

  Fly   432 SG---SGALSSSGSVPQVQT-----VQSLHTLQGVQVKK---DPD---AQQQQQQQQQQQQQQQQ 482
            :.   :........:|::::     |:...::.|.....   ||:   |..|..:|:...:::..
Mouse   436 ADMCTNARRVRKRWLPKIKSMLPEGVEMYRSVMGASAASLPLDPEFPSAAPQVFEQRIYAERRSD 500

  Fly   483 QAMTVSGAT-----------------------GGQVQQQVQQVQQQVQQQQQQQQQQQQQLQHHQ 524
            .|..|:..|                       ||.|.|:|...:|.....|...|..:|      
Mouse   501 AATIVALRTDAVNVDLSTSANPAFEANEEVDGGGSVIQEVAAPEQLPADGQSSPQAFEQ------ 559

  Fly   525 IIDSSGNITTATTSAQAAAAAQQ 547
                 ||.:::......|.|.::
Mouse   560 -----GNTSSSRPQTPVATATRR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 21/89 (24%)
BTB 35..118 CDD:197585 19/82 (23%)
GAGA 319..372 CDD:150045 17/109 (16%)
Nacc2NP_001032175.1 BTB_POZ_BTBD14A_NAC2 1..131 CDD:349598 31/181 (17%)
Prog_receptor <139..241 CDD:366948 26/134 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..196 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..272 6/35 (17%)
BEN 371..448 CDD:214981 9/76 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..586 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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