DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and BTBD18

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001138573.1 Gene:BTBD18 / 643376 HGNCID:37214 Length:712 Species:Homo sapiens


Alignment Length:411 Identity:95/411 - (23%)
Similarity:153/411 - (37%) Gaps:83/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DCTLAAGGRSFPAHKIVLCAASPFLLDLL-KNTPCK--HPVVMLAGVNANDLEALLEFVYRGEVS 96
            |..|.|.|.:.|||..:|.|.|||..:.| :..|.:  ..|:.|.|:..:.|..|::|:|..|:.
Human    35 DVLLQAEGEAVPAHCCILSACSPFFTERLERERPAQGGKVVLELGGLKISTLRKLVDFLYTSEME 99

  Fly    97 VDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHSIQLQH----MIPQHHDQD-QLIATIATAPQ 156
            |...:...:|.||:.|.:..|            .|:||:.    ..||....: :.:...:.|| 
Human   100 VSQEEAQDVLSAARQLRVSEL------------ESLQLEGGKLVKAPQGRRLNRECLQPTSAAP- 151

  Fly   157 QTVHAQVVEDIHHQGQILQATTQT---------NAAGQQQTIVTTDAAKHDQAVIQAFLPARKR- 211
              :.|:||...||....| .|.||         .:.|:::.....:....|.......|..:.| 
Human   152 --ISARVVTPSHHPHTPL-PTNQTPCPLGAIRLKSLGKEEGPQENNRQNADNLSGTLLLKRKARA 213

  Fly   212 --KPRVKKMSPTA----PKISKVE-GMDTIMGTPTSSHGSGSVQQVLGENGAEGQLLSSTPIIKS 269
              .|:.|..||::    |:.:|.: .:|..:.:|.|.:.|           .:..|| ...|..|
Human   214 CPTPQEKNSSPSSHSQEPRENKNDTALDPTVLSPPSLYPS-----------VDKHLL-PRKIRLS 266

  Fly   270 EGQKVETIVTMDPNNM------IPVT---------SANAATGEITPAQGATG--SSGGNTSGVLS 317
            ..:....|.|..|:::      :|.|         |.|..|.|..|..|...  .|..|.||:..
Human   267 RSKPSPGICTSKPSSILSGSSSVPATPGRRLWRQRSVNKETPEDKPKPGRASPLQSTPNPSGLGK 331

  Fly   318 TPKAKRAKHPPGTEKPRSRSQSE--------QPATCPICYAVIRQSRNLRRHLELRHFAKPGVKK 374
            |..::  |..|....|.|.|..|        :......|:.|: |...|:...:......||  .
Human   332 TGGSR--KRSPEVRAPNSDSAEEGQVGRVKLRKIVNGTCWEVV-QETPLKNTQDSPQIPDPG--G 391

  Fly   375 EKKSKSGNDTTLDSSMEMNTT 395
            :.:..||......:..||:.|
Human   392 DFQEPSGTQPFSSNEQEMSPT 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 27/84 (32%)
BTB 35..118 CDD:197585 27/85 (32%)
GAGA 319..372 CDD:150045 11/60 (18%)
BTBD18NP_001138573.1 BTB 24..120 CDD:306997 27/84 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..176 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..355 37/156 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..410 6/37 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 653..676
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 691..712
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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