DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and zbtb2

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001016668.1 Gene:zbtb2 / 549422 XenbaseID:XB-GENE-977864 Length:514 Species:Xenopus tropicalis


Alignment Length:449 Identity:83/449 - (18%)
Similarity:148/449 - (32%) Gaps:156/449 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPF--LLDLLKNTPCKHPVVMLAG 77
            ::|..|:..:...|..|.|.|||:|.|...|.|||.||.:.|.:  :|.:.:.:.|       ..
 Frog     5 NHGLILLQQLNAQREFGFLCDCTVAIGDVYFKAHKSVLASFSNYFKMLFVHQTSEC-------VR 62

  Fly    78 VNANDLEA-----LLEFVYRGEVS---VDHAQLPS---------LLQAAQCLNIQGL-------- 117
            :.:.|::.     ||..:|.|:::   :|..:|..         |:|.|...:..|.        
 Frog    63 LKSTDIQPDIFSYLLHLMYTGKMAPQLIDPVRLEQGIKFLHAFPLIQEASLASHGGFSHADQVFP 127

  Fly   118 -----------------------APQTVTKD----------DYTTHSIQLQHMIPQHHDQDQLIA 149
                                   |.:..|:|          |.|:.::|:          .||.:
 Frog   128 LASSLYGIQIADHQIRPPAKVTPATEKATRDTRSQTSRLGQDTTSENVQI----------SQLPS 182

  Fly   150 TIATAPQ------QTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPA 208
            .:.||.:      :||||.:..:.  ...:|...|.......:::  .||.......:...    
 Frog   183 ALPTANRTNLTFSETVHAPLSPEA--SSSVLPTATSVEENSMEES--PTDEQNTSLTIAHV---- 239

  Fly   209 RKRKPRVKKMSPTAPKI--------------SKVEGMDTIMGTPTSSHGSG----SVQQVLGENG 255
               ||.:.|.:.:.||.              |..|.:....|.|.|| .:|    |:......||
 Frog   240 ---KPSIMKRNGSFPKYYACHLCGRRFNLRSSLREHLQLHTGIPFSS-AAGQTETSISPSFCNNG 300

  Fly   256 AEGQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGATGSSGGNTSGVLSTPK 320
            |:        :.|...:..|..:..| ::|..::.:....|:                       
 Frog   301 AD--------LGKESMETTEAGIISD-SDMPQISDSPIIDGQ----------------------- 333

  Fly   321 AKRAKHPPGT---------EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP 370
             ::|:.||.|         :..:.|....:...|.||.....|..:.|.|:.: |..||
 Frog   334 -QQAETPPPTDIADIDNLEQADQEREVKRRKYECSICGRKFIQKSHWREHMYI-HTGKP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 27/108 (25%)
BTB 35..118 CDD:197585 25/132 (19%)
GAGA 319..372 CDD:150045 14/61 (23%)
zbtb2NP_001016668.1 BTB_POZ_ZBTB2 3..117 CDD:349502 29/118 (25%)
ZnF_C2H2 254..276 CDD:197676 2/21 (10%)
C2H2 Zn finger 256..276 CDD:275368 2/19 (11%)
zf-C2H2 364..386 CDD:333835 6/22 (27%)
C2H2 Zn finger 366..386 CDD:275368 6/20 (30%)
zf-H2C2_2 378..400 CDD:372612 5/14 (36%)
C2H2 Zn finger 393..443 CDD:275368
C2H2 Zn finger 450..466 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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