DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and CG6765

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_648233.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster


Alignment Length:745 Identity:134/745 - (17%)
Similarity:218/745 - (29%) Gaps:283/745 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRS-----------FPAHKIVLCAASPFLLDL 62
            |.|.|..:.|.|.|:|..|..:....|..|.:...|           ..|||.:|.|:|.|...:
  Fly     6 YHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFATM 70

  Fly    63 LKNTPCKHP-----VVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL----- 117
            .:..|..:|     ||:...::...::.|::::|.||.:|.:..|..:|:..:.|.|:||     
  Fly    71 FETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRTSS 135

  Fly   118 ----APQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATA-------PQQTVHAQVVEDIH--- 168
                ...:|....:..||: ..|:.|:......:.....||       ||.|:.||:..|::   
  Fly   136 SNGGGSGSVVTTTHHPHSL-AGHLHPREASTMYMSNGTRTALPPPPPPPQSTMSAQLQGDLYASK 199

  Fly   169 ----------------HQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKK 217
                            |...:.....|....|...:::..|:                  |.:.|
  Fly   200 PGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPKDS------------------PVIIK 246

  Fly   218 MSPTAPKISKVEGMDTIMG----------------------------------------TPTSSH 242
                :||::...|:.|:..                                        |.|...
  Fly   247 ----SPKLAAHTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTTTTVGG 307

  Fly   243 GSGSVQQVLGENGAEGQL---------LSSTPIIKSEG-QKVETIVTMD---------------- 281
            |.|||    |.:||....         .||.|:....| .:.||.:...                
  Fly   308 GGGSV----GGSGAPPSQPISICTEVGCSSCPLTAGPGADQAETTLRRTEYEEQALRERNEVGLV 368

  Fly   282 --------------------PNNMIPVTSANAATGEITPAQG----------------------- 303
                                |:....|:|..|||....|.|.                       
  Fly   369 FERRLRRESACERSRDYYEAPHFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTD 433

  Fly   304 -----ATGSSGGNTSGV----LSTPK-------------AKRAKHPPGTEKP----RSRSQSEQP 342
                 ...||..|.:.:    |::||             ..|.:..|..|..    |..:..:|.
  Fly   434 WSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKLEVNRDRGTPSEESEEHTLRDYNNFKQL 498

  Fly   343 ATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEK----KSKSGNDTTLDSSMEMNT--------- 394
            ..|.||......::.|.|||. .|...|....|:    .|.||:.|:..|::.:.:         
  Fly   499 LVCEICQKSFEDTKMLVRHLG-THAGDPTGGTERNLLPSSASGSTTSASSNLALRSVKTYVPKKR 562

  Fly   395 --TAEGDNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGAL-----SSSGSVPQ--VQTVQ 450
              .::.:|.:..|..                            .|     |:|...|.  |:.:.
  Fly   563 RRVSQQENNMDHDHV----------------------------TLLCDLCSTSFDTPAEWVRHMN 599

  Fly   451 SLHT---LQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQQQQ 512
            |.||   |.....|||         .:|:.||......|.|.:|       |...|.|.:.....
  Fly   600 SQHTEIELAMFNSKKD---------GEQKGQQPPPPPATSSSST-------VSNSQMQPKYPSST 648

  Fly   513 QQQQQQQLQHHQIIDSSGNITTATTSAQAA 542
            ..:....|..|::.:|....||.:..|..:
  Fly   649 ATRSTHSLMLHKMSNSDAVATTTSPGASTS 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 23/98 (23%)
GAGA 319..372 CDD:462719 16/69 (23%)
CG6765NP_648233.1 BTB_POZ 53..129 CDD:453885 20/75 (27%)

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