DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and CG6765

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001261582.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster


Alignment Length:745 Identity:134/745 - (17%)
Similarity:218/745 - (29%) Gaps:283/745 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRS-----------FPAHKIVLCAASPFLLDL 62
            |.|.|..:.|.|.|:|..|..:....|..|.:...|           ..|||.:|.|:|.|...:
  Fly     6 YHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFATM 70

  Fly    63 LKNTPCKHP-----VVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL----- 117
            .:..|..:|     ||:...::...::.|::::|.||.:|.:..|..:|:..:.|.|:||     
  Fly    71 FETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRTSS 135

  Fly   118 ----APQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATA-------PQQTVHAQVVEDIH--- 168
                ...:|....:..||: ..|:.|:......:.....||       ||.|:.||:..|::   
  Fly   136 SNGGGSGSVVTTTHHPHSL-AGHLHPREASTMYMSNGTRTALPPPPPPPQSTMSAQLQGDLYASK 199

  Fly   169 ----------------HQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKK 217
                            |...:.....|....|...:::..|:                  |.:.|
  Fly   200 PGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPKDS------------------PVIIK 246

  Fly   218 MSPTAPKISKVEGMDTIMG----------------------------------------TPTSSH 242
                :||::...|:.|:..                                        |.|...
  Fly   247 ----SPKLAAHTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTTTTVGG 307

  Fly   243 GSGSVQQVLGENGAEGQL---------LSSTPIIKSEG-QKVETIVTMD---------------- 281
            |.|||    |.:||....         .||.|:....| .:.||.:...                
  Fly   308 GGGSV----GGSGAPPSQPISICTEVGCSSCPLTAGPGADQAETTLRRTEYEEQALRERNEVGLV 368

  Fly   282 --------------------PNNMIPVTSANAATGEITPAQG----------------------- 303
                                |:....|:|..|||....|.|.                       
  Fly   369 FERRLRRESACERSRDYYEAPHFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTD 433

  Fly   304 -----ATGSSGGNTSGV----LSTPK-------------AKRAKHPPGTEKP----RSRSQSEQP 342
                 ...||..|.:.:    |::||             ..|.:..|..|..    |..:..:|.
  Fly   434 WSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKLEVNRDRGTPSEESEEHTLRDYNNFKQL 498

  Fly   343 ATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEK----KSKSGNDTTLDSSMEMNT--------- 394
            ..|.||......::.|.|||. .|...|....|:    .|.||:.|:..|::.:.:         
  Fly   499 LVCEICQKSFEDTKMLVRHLG-THAGDPTGGTERNLLPSSASGSTTSASSNLALRSVKTYVPKKR 562

  Fly   395 --TAEGDNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGAL-----SSSGSVPQ--VQTVQ 450
              .::.:|.:..|..                            .|     |:|...|.  |:.:.
  Fly   563 RRVSQQENNMDHDHV----------------------------TLLCDLCSTSFDTPAEWVRHMN 599

  Fly   451 SLHT---LQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQQQQ 512
            |.||   |.....|||         .:|:.||......|.|.:|       |...|.|.:.....
  Fly   600 SQHTEIELAMFNSKKD---------GEQKGQQPPPPPATSSSST-------VSNSQMQPKYPSST 648

  Fly   513 QQQQQQQLQHHQIIDSSGNITTATTSAQAA 542
            ..:....|..|::.:|....||.:..|..:
  Fly   649 ATRSTHSLMLHKMSNSDAVATTTSPGASTS 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 24/105 (23%)
BTB 35..118 CDD:197585 25/107 (23%)
GAGA 319..372 CDD:150045 16/69 (23%)
CG6765NP_001261582.1 BTB 24..132 CDD:279045 26/107 (24%)
BTB 53..130 CDD:197585 20/76 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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