DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and BtbVII

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster


Alignment Length:623 Identity:133/623 - (21%)
Similarity:185/623 - (29%) Gaps:326/623 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVV 73
            :.|.|.::..:.:|....|..:|.|||.||||.||...||||||.|.|.:...|....||:||:|
  Fly     6 FCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIV 70

  Fly    74 MLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHSIQLQHMI 138
            :|..|..:||:.:::|:|.|||:|...|||.:|:.|:.|.|:|||..                  
  Fly    71 ILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEM------------------ 117

  Fly   139 PQHHDQDQLIATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQ 203
                                                                             
  Fly   118 ----------------------------------------------------------------- 117

  Fly   204 AFLPARKRKPRVKKMSPTAPKISKVEGMDTIMGTPTSSHGSGSVQQVLGENGAEGQLLSSTPIIK 268
                                              ||                             
  Fly   118 ----------------------------------PT----------------------------- 119

  Fly   269 SEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGATGSSGGNTSGVLSTPKAKRAKHPPGTEKP 333
                        ||.|:                                                
  Fly   120 ------------DPANL------------------------------------------------ 124

  Fly   334 RSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEMNTTAEG 398
                                                  .|.:.||                    
  Fly   125 --------------------------------------TKSDSKS-------------------- 131

  Fly   399 DNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGALSSSGSVPQVQTVQSLHTLQGVQVKKD 463
             :|.|::..||||       ..:|..:|:||.|:|||:     ||             |..:...
  Fly   132 -STDGTEMVGGAG-------VGTGAGNSAGSLGAGSGS-----SV-------------GDSLWSS 170

  Fly   464 PDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQQQQQQ------QQQQ---- 518
            .:|||.|||||||.|||.||.     ....|.|||:||.|||.||||||||      ||||    
  Fly   171 SEAQQFQQQQQQQAQQQAQQQ-----HHHHQQQQQLQQQQQQAQQQQQQQQHHHHHHQQQQSGQA 230

  Fly   519 ---QLQHHQIIDSSGNITTATTSA---QAAAAAQQQAAGQQQQLVAQSD-----GSESG-APLSI 571
               |..|||:..:...::..|:.|   :....:....:|.:.....|.:     ||.:| |.||:
  Fly   231 QAAQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGNAGLSL 295

  Fly   572 AQVQT--------LQGHQI-IGNLNQVNITDFQQQQPQ 600
            ||:..        |.||.: ...|.:.:.:...:||||
  Fly   296 AQMNQMTFGAGGGLAGHSLHAAKLLKESASAELEQQPQ 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 42/89 (47%)
BTB 35..118 CDD:197585 39/82 (48%)
GAGA 319..372 CDD:150045 0/52 (0%)
BtbVIINP_647774.2 BTB 24..117 CDD:279045 45/92 (49%)
BTB 32..117 CDD:197585 41/84 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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