Protein Alignment Trl and seq

DIOPT Version :10

• Sequence 1: NP_001261846.1
• Gene: Trl / 2768981
• FlyBaseID: FBgn0013263
• Length: 623
• Species: Drosophila melanogaster
• Sequence 2: NP_001027415.1
• Gene: seq / 3772396
• FlyBaseID: FBgn0028991
• Length: 882
• Species: Drosophila melanogaster
• Alignment Length: 799
• Identity: 181/799 - (22%)
• Similarity: 250/799 - (31%)
• Gaps: 324/799 - (40%)

  Fly   104 SLLQAAQCLNIQGLAPQTVTKDDYTT---HSIQLQHMI----------------------PQHHD 143
            ::|.||..||  |: ||...:..|.:   :..|||:.|                      ||...
  Fly    47 NMLPAANTLN--GI-PQQQQQQQYASTDGNVYQLQNEILCDANGHAVTAATASYQTTASSPQQQQ 108

  Fly   144 QDQLIATIATAPQQTVHAQVVEDI---HHQGQILQATTQTN-----AAGQQQT------------ 188
            |.|       ..||.|...|.:::   .....||.....||     ||.|||.
  Fly   109 QQQ-------QQQQNVATSVADNVVTTISSSSILHTNANTNGVDTLAATQQQQQQQQQQQQQQQQ 166

  Fly   189 ----IVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDTIMGTPTSS--HGSGSV 247
                .:||............|.......|.|...:||...:|:.....|   |.|::  :..|::
  Fly   167 QHYHYITTTGEDGQTPTTIVFENYNGGMPAVSSAAPTPVPVSQANAPAT---TTTTALVNTDGTI 228

  Fly   248 QQVLGENGAEGQLLSSTP----------------IIKSEGQK-------------------VETI 277
            .:..|....|..:|.|.|                |||.:.|.                   .|..
  Fly   229 IEFDGSTYEEYHVLKSEPGSSDCLSNGSSAVAADIIKYDPQHGVVGDEEDDDENGMLHVKYEEQS 293

  Fly   278 VTMDPNN------------------MIPVTSANAATG--EITPAQGATGSSGGNT--------SG 314
            :..||.|                  .:...:|..|.|  ..|.:|..|||  |||        ||
  Fly   294 LEHDPENEHDAEQEHEYEEYQVIKAEVEAEAAELAAGTTSYTISQEQTGS--GNTVLSSMVPKSG 356

  Fly   315 VLSTPKAKRAKHPPGTEKPRSRSQSEQ-----------------------PATCPIC-----YAV 351
            ..:..|.||.:      |.|..:..||                       .|.|.:|     :..
  Fly   357 SAAAAKQKRKR------KTRVIADDEQGEYLEKMSVRGLDIARYEHIIDGVAYCLVCAKNDIFKT 415

  Fly   352 IRQSRNLRRHLELRH----------------FAKPG-VKKEKKSKSGNDTTLDSSMEMNTTAEGD 399
            .:...:.:||..|.|                |::|. :|..||.|.|     |..|..:.|.
  Fly   416 FKNKYSFQRHAYLFHEGQNRKIFACPICNKEFSRPDKMKMHKKDKHG-----DVPMPPSATT--- 472

  Fly   400 NTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGALSSSGSVPQVQTVQSLHTLQGVQVKKDP 464
            ..:.:||.....:...::...  :|:..||:.:..........:..||..:|| |:..|.|.
  Fly   473 TPLKADGPPAKRARTARTPRV--RKTKDGSTPTKKRLAQIDSVLDDVQNGESL-TMAPVSVS--- 531

  Fly   465 DAQQQQQQQ-------------QQQQQQQQ----------------QQAMTVSGAT--------- 491
            .:|||||||             .|.|.|.|                |.|:...|||
  Fly   532 HSQQQQQQQIQHSITTLAPSTPSQPQHQLQTLPSLDFSGMILPGGAQLALANPGATSSVGLQRGP 596

  Fly   492 ---GGQ--------------------VQQQVQ-----------------------------QVQQ 504
               .||                    :|||:|                             |.|:
  Fly   597 ATPNGQPAPPTTTLIYSNQLELQQALLQQQLQGQSIMIQDQAGNLVPLQLDGTQAIYTTAPQAQR 661

  Fly   505 Q--------VQQQQQQQQQQ---QQQLQHHQIIDSSGNIT--TATTSAQAAAAAQQQAAGQQQQL 556
            |        .||||||..||   |.|.|.|..:|   |:|  ::|.:|...:|.|||...|||.:
  Fly   662 QQTTATYQTTQQQQQQPAQQPAGQAQQQPHYELD---NVTYLSSTAAATPTSAEQQQQQQQQQHV 723

  Fly   557 V--AQS------DGSESGAP-LSIAQV-----------QTLQGHQIIGNLNQVNITDFQQQQPQQ 601
            :  .||      ||.::..| |..|::           .|..|.|...|.|.::    .|.|.||
  Fly   724 IGTVQSYQILTPDGLQNFQPKLETAELGDLCPYSQYTFTTHAGAQPTLNANALD----AQTQHQQ 784

  Fly   602 QQQQQQQQQQQQQQQQQTQ 620
            ..||||...||||..||||
  Fly   785 HHQQQQHHHQQQQHHQQTQ 803

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trl	NP_001261846.1	BTB_POZ_BAB-like	33..116	CDD:349624	5/11 (45%)
		GAGA	319..372	CDD:462719	16/97 (16%)
seq	NP_001027415.1	C2H2 Zn finger	404..430	CDD:275370	5/25 (20%)