DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and CG32121

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:637 Identity:137/637 - (21%)
Similarity:213/637 - (33%) Gaps:222/637 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPC-KHPV 72
            :.|.|.::.|||:|.:.:|.....|.|.|::|.||...||::||.|.|.|.:|:.:.... .|||
  Fly    30 FCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALEASNHPV 94

  Fly    73 VMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLA-------PQTVTKD----- 125
            :::.|.:...:.:||.|:|.|||:|...|:|.||..|:.|.|:|||       |:|....     
  Fly    95 IIIPGASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGGGSYM 159

  Fly   126 DYT-----------------------------THSIQLQHMIPQHHDQDQLIAT---------IA 152
            |.|                             :||:.|. .:|.......|:|.         :.
  Fly   160 DTTNEKSSEFERPTTPSPTPTPTLTPSHTPTPSHSLPLP-QLPSAALNTPLLANKLGSVNSSGMG 223

  Fly   153 TAPQQTVH-------AQVVEDIHHQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPAR- 209
            |.|.:.:.       :.:.:.::.....|..||:..|..|||..:.....:.||.....|...| 
  Fly   224 TTPLENLFKSLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQLETDCFGSKRL 288

  Fly   210 ------KRKPRVKKMSPTAPKISKVEGMDT------------IMGT-------PTSSH------- 242
                  |...|::|.....||.|......:            |:.|       ||.:|       
  Fly   289 KGDSPPKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNPNPIVATSPVTLAPPTMAHFSPQLPV 353

  Fly   243 ---GSGSVQQVLGENGAEGQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGA 304
               .|.|....||    :|||.||.|.:.|..             :.|..:..||.....|..|.
  Fly   354 VKCSSASYPSALG----QGQLYSSKPPLYSAA-------------VTPTAAQQAAQMHHHPQPGP 401

  Fly   305 T----------------------GSSGGNTSGVLSTPKAKRAKHPPGTEKPRSRSQSEQP----- 342
            :                      .::....:|.::...||...:.......|.:|.:..|     
  Fly   402 SPYISAEDHAKLQLHIEQYQREAAAAAAAAAGGMALVSAKSEPNLLSLSADRDKSLATAPIKPPS 466

  Fly   343 -----ATCPICYAVIRQSRNLRRHLE---------------------------LRHFAKPG---- 371
                 |||.||:..:....|||.|||                           .||...|.    
  Fly   467 NSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKHVSYRHPGAPSPCEN 531

  Fly   372 -VKKEKKSKSGNDTTLDSSMEM-----NTTAEGD------NTVGSDG-----------------A 407
             .::::.||.. .||:.:|..|     :|...||      .|:|..|                 |
  Fly   532 EARRKRVSKLA-ATTVPTSTPMSMSASHTVTSGDVGPAPATTLGCSGQEARNPYLFLPNQFQMAA 595

  Fly   408 GGAGSAGGQSSATSGKKS-----------------SSGSSGSGSGALSSSGS 442
            ..|..|..:||..||:.|                 .:.|:|..:|..:|:.:
  Fly   596 AAAAVAVAESSPASGQPSLDLAHEAPPSIKSEREPPTASNGEATGVEASAST 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 33/83 (40%)
GAGA 319..372 CDD:462719 19/94 (20%)
CG32121NP_001097599.1 BTB_POZ_BAB-like 54..138 CDD:349624 33/83 (40%)
C2H2 Zn finger 474..494 CDD:275370 9/19 (47%)
C2H2 Zn finger 501..518 CDD:275370 0/16 (0%)

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