DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and Zbtb9

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_998729.1 Gene:Zbtb9 / 294289 RGDID:1303050 Length:465 Species:Rattus norvegicus


Alignment Length:413 Identity:98/413 - (23%)
Similarity:154/413 - (37%) Gaps:84/413 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLD--LLKNTPCKHPVVMLAGV 78
            :.:||:.::...|..|...|.:|...||...|||.||.||||:..|  ||.:.|   .:.:...:
  Rat    30 HSSSLLESLNRHRLEGKFCDVSLLVQGRELRAHKAVLAAASPYFHDKLLLGDAP---RLTLPNVI 91

  Fly    79 NANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHSIQLQHMIPQHHD 143
            .|:..|.||:.:|.|.:.:....||:.|..|..|.:.    |.|.:.......::....|.....
  Rat    92 EADAFEGLLQLIYSGSLHLPLDALPAHLLVASGLQMW----QVVDRCSEILRELETSSGISSGGG 152

  Fly   144 QDQ--LIAT-------IATAPQQ--------TVHAQVVED------------IHHQGQILQATTQ 179
            ...  |::|       |.::|.|        |.::...|.            :..|.::.:...|
  Rat   153 ASSLTLLSTTSAGGWCIRSSPFQNPGRSSASTENSAAPESPSGGEGGELEGMLQIQVKVEEEEEQ 217

  Fly   180 TNAAGQQQTIVTTDAAKHDQAVIQA---------FLPARKRKPRVKKMSPTAPKI---------- 225
            .:||...|   |....:...||.||         .||::..:.....:.|.||.:          
  Rat   218 RSAAPPFQ---TPQPERVSGAVSQACGSHPLPTSTLPSKPSEDENSTLDPPAPPVQTSQILYVNQ 279

  Fly   226 SKVEGMDTIMGTPTSSHGSGSVQQVL-GENGAE-GQLLSSTPIIKSEGQKVETIVTMDPNNMIPV 288
            ..||..:...|..|.|.|:....:|| |||..| |:|   ..::.|.|.  ||....|| :..||
  Rat   280 ENVECKEETSGGRTLSGGAKEKTKVLPGENSEENGEL---RYLLSSGGG--ETSGAGDP-SWKPV 338

  Fly   289 TSANAATGEITPAQGATGSSGGNTSGVL---STPKA----------KRAKHPPGTEKPRSRSQSE 340
               :....||....|..|.:|....|.:   .||.|          ||....|..::....:.|.
  Rat   339 ---DLHGNEILSGGGGPGGTGQAMHGPVKLGGTPPADGKCFACLCGKRFAVKPKRDRHIMLTFSL 400

  Fly   341 QPATCPICYAVIRQSRNLRRHLE 363
            :|..|.||....:...:|..|::
  Rat   401 RPFGCGICNKRFKLKHHLTEHMK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 28/84 (33%)
GAGA 319..372 CDD:462719 12/55 (22%)
Zbtb9NP_998729.1 BTB_POZ 30..140 CDD:453885 34/116 (29%)
C2H2 Zn finger 380..397 CDD:275368 3/16 (19%)
C2H2 Zn finger 405..425 CDD:275368 5/19 (26%)
zf-C2H2 405..425 CDD:395048 5/19 (26%)
C2H2 Zn finger 432..449 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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