DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and Klhl34

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001075136.1 Gene:Klhl34 / 245683 MGIID:2685234 Length:644 Species:Mus musculus


Alignment Length:354 Identity:75/354 - (21%)
Similarity:141/354 - (39%) Gaps:69/354 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKN--TPCKHPVVMLAGV 78
            :|:||::..|.||..|.|.|.||.|.|..||||:.:|..:|.:...|.|:  ...:..|:.|...
Mouse    11 HGSSLLTGYQALRAEGFLCDVTLEAEGSEFPAHRSLLACSSDYFRALFKSHTQESRARVIHLRVP 75

  Fly    79 NANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQ---GLAPQTVTKDDYTTHSIQLQHMIPQ 140
            :|..|:.||:|:|...:.:....:...|:||..|.:.   ||.          .|.::.| :.|:
Mouse    76 SAAGLQRLLDFIYTAWLPLSMDTVEDTLEAASYLQVTEALGLC----------AHYLERQ-LAPE 129

  Fly   141 HHDQDQLIATIAT--APQQTVHAQVVEDIHHQGQILQATT------QTNAAGQQQTIVTTDAAK- 196
            :   ...||.:|.  ...:|:.|.....:.|.|.:|...|      :.|....:..:...|.|: 
Mouse   130 N---CCFIANVAARFGLARTLGAAECCIVRHLGGLLLMGTGPSGLLELNPISMKAVLGAPDVARV 191

  Fly   197 HDQAVIQAFLPARKRKPRVKKMSPTAPKISKV--------------EGMDTIMGTPTSSHGSGSV 247
            .:..::...|...:::|:|::::.::..:..:              .|...|:.|...|    .:
Mouse   192 PETRLLGLALAWLQQEPKVQRLAHSSTLLGCIRFGLVPAGVLRRIYSGSGLILPTRIKS----LI 252

  Fly   248 QQVLGENGAEGQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGATGSSGGNT 312
            .|.|..:.|.    ||.|:::.|...|.:     |...|.:.....|...:             |
Mouse   253 IQALNYHTAP----SSQPLLQGEQTSVRS-----PQTRILLVGGLRAREMV-------------T 295

  Fly   313 SGVLSTPKAKRAKHP-PGTEKPRSRSQSE 340
            ..::..|:..:.:|| |..|:...:.:.|
Mouse   296 EEIMGLPEVVQNRHPAPQPEEEEGQEEEE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 26/87 (30%)
GAGA 319..372 CDD:462719 6/23 (26%)
Klhl34NP_001075136.1 BTB_POZ_KLHL34 1..136 CDD:349573 39/138 (28%)
BACK_KLHL34 126..233 CDD:350548 16/109 (15%)
NanM 333..578 CDD:442289
KELCH repeat 358..411 CDD:276965
KELCH repeat 415..513 CDD:276965
KELCH repeat 516..559 CDD:276965
KELCH repeat 561..606 CDD:276965
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.