DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and Zbtb16

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001028496.1 Gene:Zbtb16 / 235320 MGIID:103222 Length:673 Species:Mus musculus


Alignment Length:382 Identity:77/382 - (20%)
Similarity:128/382 - (33%) Gaps:109/382 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLPMNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKN 65
            |.|....:..|....:.|.|:.....:|..|.|.|..:....:.|.||:.||...|. :.::|.:
Mouse     1 MDLTKMGMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSK-MFEILFH 64

  Fly    66 TPCKHPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTV-------T 123
            ...:|  ..|..::....:.:||:.|...:......|..||.||:.|.|:.|..|.:       .
Mouse    65 RNSQH--YTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKILETIQA 127

  Fly   124 KDDYTTHSIQ---------------LQHM-IPQHHDQDQLIATIA--TAPQQTVHAQ-------- 162
            .||..|.:..               |::: |.:|..::...|::|  :.|...|...        
Mouse   128 SDDNDTEATMADGGGEEEEDRKARYLKNIFISKHSSEESGYASVAGQSLPGPMVDQSPSVSTSFG 192

  Fly   163 ---------VVEDIHHQGQ-ILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKK 217
                     .|:.:...|| :||.|.|..|..::.|                 |....|.|.|.:
Mouse   193 LSAMSPTKAAVDSLMSIGQSLLQGTLQPPAGPEEPT-----------------LAGGGRHPGVAE 240

  Fly   218 MSPTAPKISKVEGMDTIMGTPTSSHGSGSVQQVLGENGAEGQLLSSTPIIKSEGQKVETIVTMDP 282
            :.....::.:..|.|: .|...||. ||.:...|.|...||                       |
Mouse   241 VKMEMMQVDEAPGQDS-PGAAESSI-SGGMGDKLEERSKEG-----------------------P 280

  Fly   283 NNMIPVTSANAATGEITPAQGATGSS------GGNTSGVLSTPKAKRAKHPPGTEKP 333
            .               ||.:|:..:|      |...||...:|..:..:.|||.::|
Mouse   281 G---------------TPTRGSVITSARELHYGREESGEQLSPPVEAGQGPPGRQEP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 23/89 (26%)
BTB 35..118 CDD:197585 20/82 (24%)
GAGA 319..372 CDD:150045 5/15 (33%)
Zbtb16NP_001028496.1 BTB_POZ_ZBTB16_PLZF 16..122 CDD:349514 27/108 (25%)
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
COG5048 <448..622 CDD:227381
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 492..512 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 548..568 CDD:275368
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.