DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trl and LOC1279495

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_061517091.1 Gene:LOC1279495 / 1279495 VectorBaseID:AGAMI1_012151 Length:531 Species:Anopheles gambiae


Alignment Length:536 Identity:125/536 - (23%)
Similarity:191/536 - (35%) Gaps:191/536 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVV 73
            :||.|.||.:.:..|.:.||...||||.||...||...|||:||.|.|.:..|:.|..|.:||::
Mosquito     7 FSLRWNDYSSHIARAFESLRYEEDLVDVTLYCEGRRIRAHKMVLSACSSYFKDIFKENPSQHPII 71

  Fly    74 MLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAP--QTVTKDDYTTHSIQ--- 133
            :...|..:||.:|:||:|:|||.|....|||.|..|:.|:::|||.  .|:.:..::|.|.|   
Mosquito    72 IFKNVKYSDLVSLVEFMYQGEVVVLQESLPSFLHTAELLSVRGLADTCDTIEQHLHSTISDQPTS 136

  Fly   134 -LQHMIPQHHDQDQLIATIATAPQQTV---HAQVVEDIHHQGQ-----------ILQATTQTNAA 183
             |...|.|...::...|||.|.|....   ::.:|..|..:.|           :|:::....||
Mosquito   137 SLAQQILQTQSRNMNNATITTEPVYFTLPSNSTIVPQIKIESQPPASQQLINKILLKSSNDITAA 201

  Fly   184 -------------GQQQTIVTTDAAKHDQAVIQAFLPA-----RKRKPRVKKMSPTAP------- 223
                         .||||        |.||.:|...|:     ::::|:::..:....       
Mosquito   202 LGNTIVPQAQQQQQQQQT--------HSQAHLQQPQPSTTATQQQQQPQLQTQTTIREQHQPNLV 258

  Fly   224 -KISKVEGMDTIMGTPTSSHGSGSVQQVLGENGAEG-QLLSSTPIIKSEGQKVETIVTMDPNNMI 286
             |.|....|.| :|.|..:|||.|......:..|.. |.|..:.|......|:|.:......:.:
Mosquito   259 LKASHSVTMPT-LGQPIVAHGSASQPDQNKQQSATALQDLVESVISMPRPVKIERVSKQKDTSTL 322

  Fly   287 PVTSA------NAATGEITPAQGAT---------------------------------------- 305
            |.|:|      :.|..||.|:...|                                        
Mosquito   323 PTTTAATKQATSTAAVEIKPSTSYTSLSTTTNTANQAANSGMDMYEQVPQSHETSYTANTGNGEV 387

  Fly   306 ----------GSSGGNTSGVLSTPKAKRAKHPPGTE----------------KPRS--------- 335
                      |.|...|||..|:...    ||.|.|                :|.|         
Mosquito   388 KLHISEFINVGESMATTSGGDSSTYT----HPEGFELVNENIPNRSEPDETIEPSSFEMEIVDMD 448

  Fly   336 -----------RSQSEQPA---------------------------------------TCPICYA 350
                       ..::..||                                       .|.||.|
Mosquito   449 VAGIFPDEGSTTKETTNPADDSSTAKTLDKKYKCKVCGKGFVTCKSLNMHLHIHSGRTKCGICGA 513

  Fly   351 VIRQSRNLRRHLELRH 366
            |:.::.||:||::|:|
Mosquito   514 VLSRTANLKRHMKLKH 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 36/82 (44%)
GAGA 319..372 CDD:462719 19/123 (15%)
LOC1279495XP_061517091.1 None

Return to query results.
Submit another query.