DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and LOC1278674

DIOPT Version :10

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_318279.5 Gene:LOC1278674 / 1278674 VectorBaseID:AGAMI1_010802 Length:499 Species:Anopheles gambiae


Alignment Length:410 Identity:109/410 - (26%)
Similarity:164/410 - (40%) Gaps:61/410 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVV 73
            :||.|.:|.:.:..|...||...|.||.||...||...||||:|.|.||:..|:.|..||:|||:
Mosquito     6 FSLRWNNYTSYIAGAFDSLRYEEDFVDVTLCCEGRKIRAHKILLSACSPYFKDVFKENPCQHPVI 70

  Fly    74 MLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQT--VTKDDYTTHSIQLQH 136
            :...|...||.:|:||:|:|||||...||||.|..|:.|.|:||...|  ..:...||.|...|.
Mosquito    71 IFKNVRYTDLMSLVEFMYQGEVSVPQEQLPSFLHTAEILAIRGLTDNTSDSRQPASTTTSAIAQQ 135

  Fly   137 MIPQHHDQDQLI----ATIATAPQQTVHAQVVEDIHHQGQILQATTQTN---------------- 181
            :|     |.|.:    |||.|.....:.......|.||.:::||..||.                
Mosquito   136 LI-----QSQAVLEKPATITTTDSLYLTLPSNSTIVHQPKLVQAQIQTTPIITKPLIKNTPTEMP 195

  Fly   182 AAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDTIMGTPTSSHGSGS 246
            :.....|:....|.:...|:.:..:.|..:..:.:::.....::.:.:...|...|.:.:.....
Mosquito   196 SLAASSTLAVPIAQQQQPAIAKIQVQASSQSQQPQQVQVQVQQVQQTQTHQTQQATASQTQSQSQ 260

  Fly   247 VQQVLGENGAEGQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGATGSSGGN 311
            ....|.|      ::.:..:.:.:..|.:.|:....|..||..|.      :|.....||.||.|
Mosquito   261 QATTLQE------VVENVVLPRKKKVKGQQIIASQSNTSIPSGST------VTVTTTTTGQSGDN 313

  Fly   312 ----TSGVLSTPKAKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV 372
                |.....|.|..|..|          .|:||       |....||......:|:..|...| 
Mosquito   314 EMYETDTYTITTKDAREDH----------EQAEQ-------YVESGQSSGTTLKMEIPEFISVG- 360

  Fly   373 KKEKKSKSGNDTTLDSSMEM 392
            :........|:|.|..|.|:
Mosquito   361 EPINTGNGTNNTYLQESYEL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 41/82 (50%)
GAGA 319..372 CDD:462719 11/52 (21%)
LOC1278674XP_318279.5 None

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