DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and Zbtb7a

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_006240898.1 Gene:Zbtb7a / 117107 RGDID:620946 Length:648 Species:Rattus norvegicus


Alignment Length:568 Identity:110/568 - (19%)
Similarity:194/568 - (34%) Gaps:121/568 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPC--KHPVVMLAG 77
            |:.:.::|.:...|..|.|.|..:...||.||.|:.||.|.|.:...|..:...  :..|..:..
  Rat    94 DHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDF 158

  Fly    78 VNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQG--------LAPQTVTKDDYTTHSIQL 134
            |:|..|.||::|.|...::|..|.:..:|.||:.|.|..        |..|.:..|| ...:.|.
  Rat   159 VSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSRVCTDLLERQILAADD-VGDAGQP 222

  Fly   135 QHMIPQHHDQDQLI---------------ATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAAG 184
            ....|.  ||..|:               :...||.|....:...:|:....:.:.|.....|||
  Rat   223 DGAGPT--DQRNLLRAKEYLEFFRSNPMNSLPPTAFQWPGFSAPDDDLDATKEAVAAAVAAVAAG 285

  Fly   185 QQQTI------------VTTDAAKHDQAVIQAFLPARKR--KPRVKKMSPTAPKISKVEGMDTIM 235
            ....:            .|.|..:.|..  ....|.|..  .|......||||..:...|.....
  Rat   286 DCNGLDFYGPGPPADRPPTGDGEEGDST--PGLWPERDEDAPPGGLFPPPTAPPATTQNGHYGRA 348

  Fly   236 GTPTSSHGSGSVQQVLGENG---------AEGQ---------LLSST---PIIKSEGQKVETIVT 279
            |..|....:.::.:...|.|         |||:         |.:||   .::.|.|:..::...
  Rat   349 GASTGEEEAVALSEAAPEPGDSPGFLSGAAEGEDGDAADVDGLAASTLLQQMMSSVGRAGDSDEE 413

  Fly   280 MDPNNMIPVT-----SANAATGEITPAQGATGSSGGNTSGVLSTPKAKRAKHPPGTEKPRSRSQS 339
            ..|::...:.     .:.|..|::.||....|............|..::.....|......|:.:
  Rat   414 SRPDDKGVMDYYLKYFSGAHEGDVYPAWSQKGEKKIRAKAFQKCPICEKVIQGAGKLPRHIRTHT 478

  Fly   340 -EQPATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEMN---------- 393
             |:|..|.||.....:...|:.|:......||.:.::..:...::..|.:.|.::          
  Rat   479 GEKPYECNICKVRFTRQDKLKVHMRKHTGEKPYLCQQCGAAFAHNYDLKNHMRVHTGLRPYQCDS 543

  Fly   394 ---TTAEGDNT---VGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGALSSSGSVPQVQTVQSL 452
               |....|:.   :..||..|..|..|:.....|....         ..|.:|:.|.:      
  Rat   544 CCKTFVRSDHLHRHLKKDGCNGVPSRRGRKPRVRGVPPD---------VPSGAGAPPGL------ 593

  Fly   453 HTLQGVQVKKDPDAQQQQQQQQ-QQQQQQQQQA-------MTVSGATG 492
                       |||.:..|::. :.:::.:::|       :.|:|:.|
  Rat   594 -----------PDAPRNGQEKHFKDEEEDEEEASPDGLGRLNVAGSGG 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 29/99 (29%)
BTB 35..118 CDD:197585 26/92 (28%)
GAGA 319..372 CDD:150045 12/53 (23%)
Zbtb7aXP_006240898.1 BTB 103..206 CDD:279045 29/102 (28%)
BTB 114..210 CDD:197585 27/95 (28%)
COG5048 455..>518 CDD:227381 12/62 (19%)
C2H2 Zn finger 457..477 CDD:275368 3/19 (16%)
zf-H2C2_2 472..494 CDD:290200 6/21 (29%)
C2H2 Zn finger 485..505 CDD:275368 5/19 (26%)
zf-H2C2_2 498..522 CDD:290200 4/23 (17%)
C2H2 Zn finger 513..533 CDD:275368 2/19 (11%)
zf-H2C2_2 525..550 CDD:290200 3/24 (13%)
C2H2 Zn finger 541..559 CDD:275368 2/17 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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