DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trl and Btbd18

DIOPT Version :9

Sequence 1:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:430 Identity:92/430 - (21%)
Similarity:149/430 - (34%) Gaps:99/430 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IQLLRCH-----GDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLL-KNTPC--KHPVVMLAGVNA 80
            :..|:.|     |...|..|.|.|.:.|||..:|.|.|||..:.| :..|.  :..|:.:.|:..
Mouse    19 VAFLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLEMGGLKI 83

  Fly    81 NDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL------------APQ--TVTKD---DYT 128
            ..|..|::|:|..|:.|...:...:|.||:.|.:..|            |||  .:.::   ...
Mouse    84 QTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSELETLQLEGGKLVKAPQGRRLNRECLQPPA 148

  Fly   129 THSIQLQHMIPQHHDQDQLIATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTTD 193
            ...|..:.:.|:...|..|..|...:|...|.             |::..:...|.::..:...|
Mouse   149 AAPISARVVGPKSRPQTPLPVTQTPSPLGAVR-------------LKSLGEEEGAHKKTNLPNAD 200

  Fly   194 AAKHDQAVIQAFLPARKRKPRV-----KKMSPTA----PKISKVEGMDTIMGTPTSSHGSGSVQQ 249
            :....|.         |:|.||     .:.||::    ||.:|.....|.:   .|.:.|...|.
Mouse   201 SLSDTQL---------KKKARVCLTQESRSSPSSQREGPKETKSNPGPTAL---PSLYPSVDEQL 253

  Fly   250 V-----LGENGAEGQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEIT---PAQGATG 306
            :     |..:.....:.:|||          :.:...|::| |.........:.|   .|||...
Mouse   254 LPRKIRLSRSKPSPHVYTSTP----------SSILSGPSSM-PTAPGRRLWRQRTVSKEAQGVDK 307

  Fly   307 SSGGNTSGVLSTP-------KAKRAKHPPGTEKPRSRSQSE--------QPATCPICYAVIRQSR 356
            ...|....:.|||       .|:..|..|....|.|.|..|        :......|:.|: |..
Mouse   308 QKPGEVRPLQSTPDPSDVGKPAENKKQSPELRAPTSSSVEEGQVGRVKLRKIVNGTCWEVV-QEP 371

  Fly   357 NLRRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEMNTTA 396
            .||...:.....:|   .:.:..||  |.|.|..|....|
Mouse   372 PLRNTQDSPQILEP---SDVEEPSG--TLLSSVNEQEIPA 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrlNP_001261846.1 BTB 27..117 CDD:279045 29/97 (30%)
BTB 35..118 CDD:197585 27/97 (28%)
GAGA 319..372 CDD:150045 14/67 (21%)
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 33/117 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 38/184 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 5/28 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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