DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen34 and SEN34

DIOPT Version :9

Sequence 1:NP_001036605.2 Gene:Tsen34 / 2768977 FlyBaseID:FBgn0053260 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_009405.1 Gene:SEN34 / 851267 SGDID:S000000066 Length:275 Species:Saccharomyces cerevisiae


Alignment Length:284 Identity:69/284 - (24%)
Similarity:122/284 - (42%) Gaps:33/284 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VFNVDDYMELRSKHRIMGAPVGTANTKGWSPNQSTLPVELSKFETQLLLDENIA--KLVDKSKD- 73
            ||:: |:::|..|..|.|...||..|........::|:.|...:...|...|:|  ||:.:..| 
Yeast     5 VFDI-DHIKLLRKWGICGVLSGTLPTAAQQNVFLSVPLRLMLEDVLWLHLNNLADVKLIRQEGDE 68

  Fly    74 LKAKPTAE---KLEECKADFESRLLGQEEALKTE----KLRETERYMDKILTGKRKKLLKQGKNE 131
            :....|.|   ||.:...|..::....:...|.:    ||::..|..||....:.::|.|...| 
Yeast    69 IMEGITLERGAKLSKIVNDRLNKSFEYQRKFKKDEHIAKLKKIGRINDKTTAEELQRLDKSSNN- 132

  Fly   132 LAAALTDKDVLLEMSVNFKFDRQNALL-EVHCEHPT---DHSAQIVTGPIVHTNSLK-YRVFKDL 191
                    |.|:|.|:.......:.:| ::..:..:   |..:.::.........:: |.::|.|
Yeast   133 --------DQLIESSLFIDIANTSMILRDIRSDSDSLSRDDISDLLFKQYRQAGKMQTYFLYKAL 189

  Fly   192 WRRGKYVTSGDAFGADFLVYPGDPMIYHASHIVI-----LHEQPVIKPLELIAKVRLSVIVNKSC 251
            ..:|..::.|..||..|:.|||||:.:| ||:.|     .|.:| |..:.:|:..||...|.|..
Yeast   190 RDQGYVLSPGGRFGGKFIAYPGDPLRFH-SHLTIQDAIDYHNEP-IDLISMISGARLGTTVKKLW 252

  Fly   252 VFAYEMENNEEEIHYQTVAWCNLG 275
            |.....|.. :|.|:.::.|...|
Yeast   253 VIGGVAEET-KETHFFSIEWAGFG 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen34NP_001036605.2 tRNA_int_endo 183..266 CDD:280199 28/88 (32%)
SEN34NP_009405.1 endA 94..272 CDD:129424 44/189 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345509
Domainoid 1 1.000 43 1.000 Domainoid score I3203
eggNOG 1 0.900 - - E1_COG1676
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 51 1.000 Inparanoid score I1830
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52945
OrthoFinder 1 1.000 - - FOG0005791
OrthoInspector 1 1.000 - - oto100368
orthoMCL 1 0.900 - - OOG6_102602
Panther 1 1.100 - - LDO PTHR13070
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2288
SonicParanoid 1 1.000 - - X4770
TreeFam 1 0.960 - -
1413.790

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