DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen34 and SEN1

DIOPT Version :10

Sequence 1:NP_001036605.2 Gene:Tsen34 / 2768977 FlyBaseID:FBgn0053260 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_190145.1 Gene:SEN1 / 823701 AraportID:AT3G45590 Length:237 Species:Arabidopsis thaliana


Alignment Length:103 Identity:29/103 - (28%)
Similarity:42/103 - (40%) Gaps:27/103 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 VHTNSLKYRVFKDLWR-------------------RGK--YVTSGDAFGADFLVYPGDPMIYHAS 221
            :|..||:..|  ||||                   |.|  .|.||..:|.||:||...|.:.|:.
plant    96 LHGRSLENEV--DLWRSMSSFKQDFAILYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSE 158

  Fly   222 HIVILHEQPVIKPL----ELIAKVRLSVIVNKSCVFAY 255
            :.|::........|    ::...|||:..|.||.:..|
plant   159 YAVLVQSIGGNDRLKVWSDIHCSVRLTGSVAKSLLVLY 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen34NP_001036605.2 tRNA-intron_lyase_C 183..271 CDD:411767 27/98 (28%)
SEN1NP_190145.1 tRNA_int_endo_N 35..108 CDD:397071 5/13 (38%)
tRNA-intron_lyase_C 117..224 CDD:411767 21/80 (26%)

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