DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen34 and TSEN2

DIOPT Version :9

Sequence 1:NP_001036605.2 Gene:Tsen34 / 2768977 FlyBaseID:FBgn0053260 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001308207.1 Gene:TSEN2 / 80746 HGNCID:28422 Length:516 Species:Homo sapiens


Alignment Length:131 Identity:39/131 - (29%)
Similarity:55/131 - (41%) Gaps:31/131 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 VTGPIVHTNSLKYRVFKDLWRRGKYVTSGDAFGADFLVYPGDPMIYHASHIVILH------EQPV 231
            |..|...|..:.|..|:.   :|.....|..:|.|.|:|...|..||||:.||:.      |..:
Human   334 VVQPTFRTTYMAYHYFRS---KGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSL 395

  Fly   232 IKPL---ELIAKVRLSVIVNKSCVFAY----------EMENNE--EEIHYQT-------VAWCNL 274
            .:||   .|.|..|:||.|:|..:..|          |||:.|  :.|..|:       |..|:|
Human   396 RRPLSWKSLAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQSRSVVQAGVQCCDL 460

  Fly   275 G 275
            |
Human   461 G 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen34NP_001036605.2 tRNA_int_endo 183..266 CDD:280199 31/103 (30%)
TSEN2NP_001308207.1 tRNA_int_endo_N 41..>68 CDD:280873
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..204
tRNA_int_endo_N <281..329 CDD:280873
SEN2 <297..425 CDD:224590 29/93 (31%)
tRNA_int_endo 339..422 CDD:280199 26/85 (31%)
GVQW 450..497 CDD:290611 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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