DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen34 and tsen34

DIOPT Version :9

Sequence 1:NP_001036605.2 Gene:Tsen34 / 2768977 FlyBaseID:FBgn0053260 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_002935038.3 Gene:tsen34 / 100380139 XenbaseID:XB-GENE-5932624 Length:308 Species:Xenopus tropicalis


Alignment Length:307 Identity:81/307 - (26%)
Similarity:137/307 - (44%) Gaps:42/307 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLNGTGFVFNVDDYMELRSKHRIMGAPVGTANTKGWSPNQST---LPVELSKFETQLLLDENIAK 66
            ||.|..||:..||...:|.:|.::|..||....|   |.|::   ||::|...|.:||::...|.
 Frog     6 LLEGKAFVWKADDVQMIREQHGLVGNLVGALVRK---PRQNSRLGLPLQLMPEEVRLLVEIGAAV 67

  Fly    67 LV----------------DKSKDLKAKPTAEKLEECKADFESRLLG-----QEEALKTEKLRETE 110
            ||                .:|.:....|.....|:.:.:...:.|.     |.:....:|.|..|
 Frog    68 LVRGLSGEGKIHKEVALEPESAESSPSPNDVNDEQPETEAYDKYLNESYKEQRKLALEDKRRTLE 132

  Fly   111 RYMDKILTGKRKKLLKQGKNELAAALTDKDVLLE---MSVNFKFDRQNALLEVHCEHPT--DHSA 170
            ...|:|..|:.::..::...|.|...:.:..:.|   :...|:|.::..::.:...||:  |...
 Frog   133 SLADRIAEGRSRRKRQRSDQEDATESSFQGPIKELQNLEETFQFPKEAMMVHLPTAHPSCGDTEE 197

  Fly   171 QIVTGPIVH-------TNSLKYRVFKDLWRRGKYVTSGDAFGADFLVYPGDPMIYHASHIVILHE 228
            ..:....||       .:.::|:|||.||::|.::|||..||.||||||||||.:||..|.|...
 Frog   198 VDMCQASVHWPYAGQKEHEVRYKVFKSLWQKGYFLTSGSKFGGDFLVYPGDPMRFHAHFIAICFP 262

  Fly   229 QPVIKPL-ELIAKVRLSVIVNKSCVFAYEMENNEEEIHYQTVAWCNL 274
            .....|| :::...||...|.|:.:.....|..  |:.:.::.|..|
 Frog   263 YKEEIPLSDIVTAGRLGTNVKKTVLLCSADEGG--EVTFTSLQWSGL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen34NP_001036605.2 tRNA_int_endo 183..266 CDD:280199 34/83 (41%)
tsen34XP_002935038.3 PDDEXK_nuclease-like 216..304 CDD:424071 34/89 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9629
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 98 1.000 Inparanoid score I4885
OMA 1 1.010 - - QHG52945
OrthoDB 1 1.010 - - D1621103at2759
OrthoFinder 1 1.000 - - FOG0005791
OrthoInspector 1 1.000 - - oto105533
Panther 1 1.100 - - LDO PTHR13070
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2288
SonicParanoid 1 1.000 - - X4770
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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