DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32318 and PSF1

DIOPT Version :9

Sequence 1:NP_995952.1 Gene:CG32318 / 2768976 FlyBaseID:FBgn0052318 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_010296.3 Gene:PSF1 / 851576 SGDID:S000002420 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:158 Identity:37/158 - (23%)
Similarity:76/158 - (48%) Gaps:35/158 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QVYVRVRPLNSRERCIRS-----AEVVDVVGPREVVTRHTLDSKLTKKFTFDR----SFGPESKQ 76
            |.:|.:..:...:||:.:     .:::|.:    ....:.||  |....||.:    :...:.::
Yeast    71 QYFVTLLCMERNKRCLLAYQRLRTDILDSM----AWNNNGLD--LMSSITFSQQDTNNLSHQEQE 129

  Fly    77 -----CDVYSVVVS-PLIEEVLNGYNCTVFAYGQTGNNLRPPKSLYIEVRCMEDYGKFELDDGEV 135
                 ||:.:.:.| .|::..|:|             :|.||..::|:||.::|.|:.:.:.| |
Yeast   130 YLKEYCDLITDLKSGDLVDIDLSG-------------SLVPPSDVFIDVRVLKDAGEIQTEYG-V 180

  Fly   136 IHLKKNSQHYLPRAQVESLVRQGILHHI 163
            .:|.|:||.::.::.||.|::||.|..|
Yeast   181 FNLIKDSQFFVRQSDVERLIQQGYLQKI 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32318NP_995952.1 Motor_domain 17..>106 CDD:277568 16/99 (16%)
PSF1NP_010296.3 COG5230 1..208 CDD:227555 36/156 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 43 1.000 Domainoid score I3185
eggNOG 1 0.900 - - E1_COG5230
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003503
OrthoInspector 1 1.000 - - otm46514
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.860

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