DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32318 and PSF1

DIOPT Version :9

Sequence 1:NP_995952.1 Gene:CG32318 / 2768976 FlyBaseID:FBgn0052318 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_001323116.1 Gene:PSF1 / 844359 AraportID:AT1G80190 Length:207 Species:Arabidopsis thaliana


Alignment Length:159 Identity:36/159 - (22%)
Similarity:66/159 - (41%) Gaps:43/159 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KSNQNIQVY---VRVRPLNSRERCIRS-----AEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFG 71
            ::|:|...|   :....|...:||:.:     ||:|..:..|..:....|.|::.:|.|      
plant    58 QNNRNADHYGALIHHLALIRNKRCLMAYVYNRAEIVRDLAWRVGLELLDLPSEIQEKLT------ 116

  Fly    72 PESKQCDVYSVVVSPLIEEVLNGYNCTVFAY-GQTGNNLR----PPKSLYIEVRCMEDYGKFELD 131
                          .|.:|....::..:.:| |:.|..|.    |||..||:||.::|     :|
plant   117 --------------TLEKEYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDD-----ID 162

  Fly   132 DGEVI-----HLKKNSQHYLPRAQVESLV 155
            :|.|:     :..::|.|:|.|...|..:
plant   163 EGIVLSDKTTNFARHSMHFLKRTDAEPYI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32318NP_995952.1 Motor_domain 17..>106 CDD:277568 18/97 (19%)
PSF1NP_001323116.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5230
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249159at2759
OrthoFinder 1 1.000 - - FOG0003503
OrthoInspector 1 1.000 - - otm3552
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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