DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HB51

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_195999.2 Gene:HB51 / 831723 AraportID:AT5G03790 Length:235 Species:Arabidopsis thaliana


Alignment Length:132 Identity:40/132 - (30%)
Similarity:63/132 - (47%) Gaps:26/132 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITP----LI 220
            :|.|.     |.:||..|| ::.|||...|      :|.:|..      :..|||...|    ::
plant    17 MPPPW-----PESSSFNSL-HSFNFDPYAG------NSYTPGD------TQTGPVISVPESEKIM 63

  Fly   221 NDYA---DSSKRI-RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK 281
            |.|.   ::::.| :...||.||..|||.|.....|...|:::::..|.|..:|:.:||||||.:
plant    64 NAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRAR 128

  Fly   282 QK 283
            .|
plant   129 WK 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 21/57 (37%)
HB51NP_195999.2 Homeodomain 77..130 CDD:459649 19/52 (37%)
HALZ 132..166 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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