Protein Alignment ind and HB4

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_182018.1
• Gene: HB4 / 819100
• AraportID: AT2G44910
• Length: 318
• Species: Arabidopsis thaliana
• Alignment Length: 285
• Identity: 70/285 - (24%)
• Similarity: 118/285 - (41%)
• Gaps: 67/285 - (23%)

  Fly    62 SLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPH---VSSSPGSLYH-PYAQLFAS---KRKS 119
            ||.:...||::...:.:......::::::.  ||.|   .:|.|..::: .:..||.|   ||.:
plant    11 SLSLGNSQQKEPSLRLNLMPLTTSSSSSSF--QHMHNQNNNSHPQKIHNISWTHLFQSSGIKRTT 73

  Fly   120 SGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSP-SASSSAS-----L 178
            :..::..|.:..   ..|.|..|          ..|..:.|.|..:..:|| ||.||.|     |
plant    74 AERNSDAGSFLR---GFNVNRAQ----------SSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDL 125

  Fly   179 DYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYAD------SSKRIRTAFTST 237
            ......||.:.:|    :|||      :...|||        :|..|      |.|::|  .:..
plant   126 AVARGGDENEAER----ASCS------RGGGSGG--------SDDEDGGNGDGSRKKLR--LSKD 170

  Fly   238 QLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLS------T 296
            |.|.||..|..::.|:..:::.:|.:|.|..:||::||||||.:.|...:|.....|.      |
plant   171 QALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLT 235

  Fly   297 NSNGSPQ-------ASPVSPQVKVH 314
            ..|...|       |..:||.:.:|
plant   236 EENRRLQKEVSELRALKLSPHLYMH 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	19/55 (35%)
HB4	NP_182018.1	HD-ZIP_N	8..124	CDD:461370	28/127 (22%)
		Homeodomain	162..216	CDD:459649	19/55 (35%)
		HALZ	218..261	CDD:128634	9/43 (21%)