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Protein Alignment ind and HB17
DIOPT Version :10
| Sequence 1: | NP_996087.2 |
Gene: | ind / 2768974 |
FlyBaseID: | FBgn0025776 |
Length: | 320 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_178252.2 |
Gene: | HB17 / 814671 |
AraportID: | AT2G01430 |
Length: | 275 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 101 |
Identity: | 30/101 - (29%) |
| Similarity: | 44/101 - (43%) |
Gaps: | 20/101 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 201 NSSPLKNHSSGG-------PVEITPLINDYADSS-----------KRIRTAFTSTQLLELEREFS 247
:||||.:..||| .:...|...|..|.. |::| .|..|...||..|.
plant 94 SSSPLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHDDGSAPPRKKLR--LTREQSRLLEDSFR 156
Fly 248 HNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK 283
.|..|:..::..:|..|.|..:|:::||||||.:.|
plant 157 QNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSK 192
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| ind | NP_996087.2 |
Homeodomain |
228..284 |
CDD:459649 |
20/56 (36%) |
| HB17 | NP_178252.2 |
HOX |
136..192 |
CDD:197696 |
19/57 (33%) |
| HALZ |
194..237 |
CDD:128634 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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