Protein Alignment ind and hmx1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001106998.1
• Gene: hmx1 / 797503
• ZFINID: ZDB-GENE-080204-54
• Length: 282
• Species: Danio rerio
• Alignment Length: 293
• Identity: 66/293 - (22%)
• Similarity: 98/293 - (33%)
• Gaps: 102/293 - (34%)

  Fly    72 QQQQQQHAAAAAAAAA--------------------------AAAALQQHPHVSSSPGSLYHPYA 110
            ::.||||.:..:..::                          .|.||:::|:.          |.
Zfish     3 EKSQQQHTSTTSRGSSFFIENLLGSCRTEKPVCPIKDNDGTERANALKRYPNA----------YR 57

  Fly   111 QLFASKRKSSGFS------NYEGCYPS-PPLSANPNSQQLPPIHN---LYGSPVVGGLPLPEPGS 165
            :....:..|:||.      .::|...| .|...:.||.:......   |...|:.|.:.....|
Zfish    58 KEMCVQASSAGFKTEISPLEWKGRETSRSPREESRNSSEYSRSDRDTPLASEPLDGVVDRKMSG- 121

  Fly   166 FCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRI 230
             |.......:..|     |||..|     ..:..|.|:                      ..|:.
Zfish   122 -CAVDEGDDARQL-----FDERSG-----PDTSEPGSA----------------------RKKKT 153

  Fly   231 RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK---GGSESPTF 292
            ||.|:.:|:.:||..|....|||...|..:|..|.|:|.||||||||||.|.|:   ...|:..|
Zfish   154 RTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAADLEAVNF 218

  Fly   293 N-------------------LSTNSNGSPQASP 306
            |                   :||.|....|.||
Zfish   219 NHNSQRIVRVPILYHDKATPMSTLSFNVSQVSP 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	27/55 (49%)
hmx1	NP_001106998.1	Homeodomain	151..207	CDD:459649	27/55 (49%)