Protein Alignment ind and Vax2

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_072159.2
• Gene: Vax2 / 64572
• RGDID: 621133
• Length: 292
• Species: Rattus norvegicus
• Alignment Length: 148
• Identity: 51/148 - (34%)
• Similarity: 63/148 - (42%)
• Gaps: 46/148 - (31%)

  Fly   185 DEPQGK---RFKHE---------SSCSPN-------SSPLKNHSSGGPVE--------------- 215
            :||.|:   |.:|.         .|.||.       |||..:..|||..:
  Rat    16 EEPGGRSGCRGEHRGAEDLRADTGSTSPREIAGTSASSPAGSRESGGDSDGQQALGETDHCRRIL 80

  Fly   216 -----------ITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEK 269
                       :.|...| .|..||.||:||:.||..||.||....|:....|.|:|.:|.|||.
  Rat    81 VRDAKGTIREIVLPKGLD-LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSET 144

  Fly   270 QVKIWFQNRRVKQKKGGS 287
            |||:||||||.||||..|
  Rat   145 QVKVWFQNRRTKQKKDQS 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	31/55 (56%)
Vax2	NP_072159.2	vax upstream domain	74..101		2/27 (7%)
		homeobox	102..161		33/58 (57%)
		Homeodomain	103..159	CDD:459649	31/55 (56%)
		vax downstream domain	182..193
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..241
		vax terminal domain	266..274