Protein Alignment ind and hoxa11a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001428668.1
• Gene: hoxa11a / 58061
• ZFINID: ZDB-GENE-000823-8
• Length: 284
• Species: Danio rerio
• Alignment Length: 301
• Identity: 81/301 - (26%)
• Similarity: 125/301 - (41%)
• Gaps: 73/301 - (24%)

  Fly    20 KKEKLGSPGGSPTAAAAVAAA--AMLPS-IPMLP--YPASYVGSYLFSLGIQQQQQQQQQQQQHA 79
            ::..:||....|:....|..|  :.||| :...|  .|.:|  ||..:|          .|.||.
Zfish     6 ERVSVGSNMYLPSCTYYVPGADFSTLPSFLSQSPSTRPVTY--SYASNL----------PQVQHV 58

  Fly    80 AAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPS--------PPLSA 136
            ........|.....:.||    .|.|.|.|         .|..|.:..|.|:        |..:|
Zfish    59 REVTFRDYAIDPSTKWPH----RGPLAHCY---------PSEDSVHRECLPAVTTVGEMFPKNNA 110

  Fly   137 NP---NSQQLPPIHNLYGSPVVGGLPLPEP-GSFCTSPSASSSASLDYTNNF------------- 184
            :.   ::.......|.||:....|: ||:. ..|..:....|.:.:|  |::
Zfish   111 SAYYHSTSNTTSASNFYGNVGRNGV-LPQAFDQFFDTAYGGSDSVVD--NDYAARDKMHSSKQST 172

  Fly   185 ------DEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELE 243
                  .:|:||. :.|:| ||.|      |||...|.|...|......|: |..:|..|:.|||
Zfish   173 PAPAPEQQPEGKE-RPETS-SPES------SSGNNEEKTSGANSGPRFRKK-RCPYTKFQIRELE 228

  Fly   244 REFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            |||..:.|:::.:|::::..|.|:::||||||||||:|:||
Zfish   229 REFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)
hoxa11a	NP_001428668.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	163..214		14/58 (24%)