DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and hoxb5b

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:176 Identity:62/176 - (35%)
Similarity:83/176 - (47%) Gaps:34/176 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 CYPSPPL----SANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQ 188
            |..|..|    |:.|:.|..|          .|...|....:. ||.:::..|..|.||...|.:
Zfish    98 CATSDTLELKGSSPPSDQSTP----------TGNSRLTNSNNL-TSSNSTHFADTDETNVSSETE 151

  Fly   189 --------GKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDY-------ADSSKRIRTAFTSTQ 238
                    .:..|.||..:..::|    :.|...:|.|.:...       ....||.|||:|..|
Zfish   152 EGAQTTTTSRTQKQESVATSTTTP----NDGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQ 212

  Fly   239 LLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            .||||:||..|.||:|.||||||:.|.|||:|:||||||||:|.||
Zfish   213 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 35/51 (69%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 21/98 (21%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeobox 205..257 CDD:278475 35/51 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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