Protein Alignment ind and hoxa3a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571609.2
• Gene: hoxa3a / 58049
• ZFINID: ZDB-GENE-000823-3
• Length: 410
• Species: Danio rerio
• Alignment Length: 286
• Identity: 87/286 - (30%)
• Similarity: 118/286 - (41%)
• Gaps: 81/286 - (28%)

  Fly    53 ASYV-GSYLFSLGIQQQ---------QQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYH 107
            |:|. ||.::| |:..|         .|||..|..||.:.....|.:.   |.|.:|
Zfish     4 ATYCDGSAIYS-GLPYQSANGLGYDASQQQYLQALHAESEYHRPACSL---QSPGIS-------- 56

  Fly   108 PYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSA 172
              |.|..|...|.......|. .:.....:.|.|  ||                      |:||.
Zfish    57 --AGLHTSNEMSEVCQQINGT-QATVTDTSDNKQ--PP----------------------TAPSG 94

  Fly   173 -SSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKN-------------HSSGGPVEITPLINDY 223
             ||.:||:...|.|...    |:....||..|..|:             ..|...:.:.....|.
Zfish    95 PSSPSSLNQIPNIDSAA----KNPVHVSPTPSTRKHIFPWMKESRQNTKQKSCSIISVESCAGDK 155

  Fly   224 AD----SSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            :.    :|||.|||:||.||:|||:||..|.||.|.||:|:||.|.|:|:|:||||||||:|.||
Zfish   156 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 220

  Fly   285 G----------GSESPTFNLSTNSNG 300
            .          |::||...:|.:|.|
Zfish   221 DQKGLGMMPSPGAQSPHSPVSLSSGG 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	36/55 (65%)
hoxa3a	NP_571609.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	79..126		17/74 (23%)
		Antp-type hexapeptide	127..132		0/4 (0%)
		Homeodomain	164..220	CDD:459649	36/55 (65%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	222..249		6/25 (24%)
		DUF4074	346..408	CDD:463833