Protein Alignment ind and hoxc6b

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_005172831.1
• Gene: hoxc6b / 58045
• ZFINID: ZDB-GENE-000822-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 220
• Identity: 72/220 - (32%)
• Similarity: 99/220 - (45%)
• Gaps: 65/220 - (29%)

  Fly   129 YPSPPLSANPNSQQ--LPPI----------------------HNLYGSP-------VVGGLPLP- 161
            :.:|.||.:.||.|  ||.:                      :.:|.:|       |:.|...|
Zfish     5 FTNPSLSCHLNSGQEVLPSVAISSTNYDPVRHFSPYGAAVAQNRIYSNPFYSHQENVMFGSSRPY 69

  Fly   162 EPGS-----------FCTSPSASSSASLDYTNNFDEPQGKRFKHESSCS--PNSSPLKNHSSGGP 213
            :.||           .|......:..||  |.::...|||..:.:.|..  |....:.:||..|
Zfish    70 DYGSNMFYQDKDVLPSCRQGFGQTQGSL--TQDYASDQGKTMEPKGSVQIYPWMQRMNSHSGVG- 131

  Fly   214 VEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNR 278
                     |....:|.|..::..|.||||:||.:|.||:|.|||||||.|.|||:|:|||||||
Zfish   132 ---------YGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNR 187

  Fly   279 RVKQKKGGSESPTFNLST--NSNGS 301
            |:|.||   ||   ||::  |.|||
Zfish   188 RMKWKK---ES---NLTSILNDNGS 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	33/51 (65%)
hoxc6b	XP_005172831.1	Homeobox	140..192	CDD:278475	33/51 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910