DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and hoxb7a

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001108563.1 Gene:hoxb7a / 58044 ZFINID:ZDB-GENE-000329-2 Length:227 Species:Danio rerio


Alignment Length:262 Identity:80/262 - (30%)
Similarity:111/262 - (42%) Gaps:66/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VGSYLFSLGI--QQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRK 118
            |.|..||.|:  :|.........|.|:...:|:..|      |..|||..||...|.      ..
Zfish    16 VASSAFSTGVFPEQTSCAFSCSSQRASGYGSASTGA------PVSSSSSVSLPSMYT------NG 68

  Fly   119 SSGFSNYEGCYPSP----PLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLD 179
            :|..|:.:|.||:.    .:|.|.:|       :|:..|   .||:...|..|.:.|:.......
Zfish    69 TSLSSHTQGMYPTAYELGAVSLNMHS-------SLFDHP---NLPMVSAGDLCKAQSSGKEEQRG 123

  Fly   180 YTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELER 244
            |..|                 |.:.|:         |.|.:.......||.|..::..|.||||:
Zfish   124 YHQN-----------------NENNLR---------IYPWMRSTGADRKRGRQTYSRYQTLELEK 162

  Fly   245 EFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQASPVSP 309
            ||..|.||||.||||||:.|.|:|:|:||||||||:|.||.       |.||:     :.||.:.
Zfish   163 EFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-------NKSTD-----RCSPAAD 215

  Fly   310 QV 311
            |:
Zfish   216 QI 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 32/51 (63%)
hoxb7aNP_001108563.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeobox 149..201 CDD:278475 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..227 8/29 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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