Protein Alignment ind and hoxc11b

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_009298848.2
• Gene: hoxc11b / 570925
• ZFINID: ZDB-GENE-000822-3
• Length: 306
• Species: Danio rerio
• Alignment Length: 328
• Identity: 74/328 - (22%)
• Similarity: 119/328 - (36%)
• Gaps: 109/328 - (33%)

  Fly    18 SQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAA 82
            ||.:::..|..|.   .|:.|:...|||...:| ..|.|.|:|          .|.|.:|...:.
Zfish    12 SQSRKERTSEFGE---RASCASNLYLPSTYYVP-EFSTVSSFL----------PQAQSRQITYSY 62

  Fly    83 AAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPS---------PPLSANP 138
            :........::..|...:..|..:|.              .||..||..         ||.:.
Zfish    63 STNFTQVPQVRDLPFELNPSGKWHHR--------------GNYSSCYAEEDLVHRDCLPPSAT-- 111

  Fly   139 NSQQLPPIHNLYG----SPVVGGLPLPEPGSFCTSPSASSSASLDYTN----NFDE-----PQGK 190
            .::.|....|:|.    .|.:            ..|.....:|:..||    :||.     ..|.
Zfish   112 MTEMLMKNENVYNHHHYHPAI------------NHPGTGFYSSIGKTNVLPQSFDRFLDCAHSGA 164

  Fly   191 RFKHESSCSPNSSPLKNHSSGGP---VEITPLINDYADSSKRI---------------------- 230
            ....|.:|      |:..|||.|   .:::.::...||..|.:
Zfish   165 DGGSEGNC------LQKGSSGKPESASQVSSVLRSTADGEKELECEKNTTSGSFETSSGTKNDNQ 223

  Fly   231 --------------RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK 281
                          |..:|..|:.||||||..|.|:::.:|::::..|.|:::||||||||||:|
Zfish   224 TKSGHSTTPRMRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRILNLTDRQVKIWFQNRRMK 288

  Fly   282 QKK 284
            :||
Zfish   289 EKK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	26/91 (29%)
hoxc11b	XP_009298848.2	None