DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and meox2b

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001038589.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:289 Species:Danio rerio


Alignment Length:268 Identity:82/268 - (30%)
Similarity:116/268 - (43%) Gaps:59/268 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 QHPHVSSSPGSLYHP-YAQLFASKRKSSGFSNYEGCYPSPPLS--------------ANPNSQQL 143
            ::||   :|....|| :.|....:.....:.:..|  ||||.|              .:| :.|.
Zfish    10 RNPH---APSQALHPAFTQALHGRSDHISYPDLPG--PSPPCSYAGEESSFGGAHHRVHP-APQH 68

  Fly   144 P--PIHNLYGSPVV-------GGLPLPEPGS----FC-TSPSASSSASLDYTNNFDEPQGKRFKH 194
            |  |.|:.:..|.:       .||.||.|.:    .| |...:....:.:.|....:|.|     
Zfish    69 PHHPQHHQWHVPQMPSIESERHGLCLPHPDAAAPELCGTGAGSQGMCAGNPTLTGSDPSG----- 128

  Fly   195 ESSCSP------NSSPL-------KNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREF 246
             .||.|      |.||:       |..|.....:.....:|.:...::.|||||..|:.|||.||
Zfish   129 -VSCVPGEYGRQNMSPVEPERRSSKGKSDSSDSQDGSYKSDVSSKPRKERTAFTKEQIRELESEF 192

  Fly   247 SHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK--KGGSESPTF---NLSTNSNGSPQASP 306
            :|:.||:||||.|||..|.|:|:|||:||||||:|.|  |||.:....   .|.....|:...|.
Zfish   193 AHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSE 257

  Fly   307 VSPQVKVH 314
            .||.|.:|
Zfish   258 FSPMVGLH 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 34/51 (67%)
meox2bNP_001038589.1 Homeobox 177..229 CDD:278475 34/51 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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