Protein Alignment ind and nkx6.2

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001129256.1
• Gene: nkx6.2 / 565782
• ZFINID: ZDB-GENE-070626-1
• Length: 278
• Species: Danio rerio
• Alignment Length: 260
• Identity: 61/260 - (23%)
• Similarity: 91/260 - (35%)
• Gaps: 42/260 - (16%)

  Fly    73 QQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSAN 137
            |......:|....:...|||.....:.:|    ..|||     .:..:||        ..|...|
Zfish     6 QMDSNRQSAFVLGSTPLAALHNMTEMKTS----LFPYA-----LQSPAGF--------KAPSLGN 53

  Fly   138 PNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNS 202
            .|||  .|:...:|...:.|.|:...|...:.....:..:......|:.....|:....:..|..
Zfish    54 LNSQ--IPLGTPHGISDILGRPITTAGQLLSGFPRINGLATSAGMYFNPAAVSRYPKPLTELPGR 116

  Fly   203 SPL--KNHSSGGP-----VEITPLIN---DYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRR 257
            :|:  .....|.|     |......|   |.....|..|..|:..|:..||:.|....||:...|
Zfish   117 APIFWPGMMQGSPWRDPRVPCAAQANMMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPER 181

  Fly   258 IEIANRLRLSEKQVKIWFQNRRVK------------QKKGGSESPTFNLST-NSNGSPQASPVSP 309
            ..:|..|.::|.|||:||||||.|            :||..||:.....|: |........|:.|
Zfish   182 ARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMATAKKKHDSETEKMKESSDNDEDDEYNKPLDP 246

  Fly   310  309
            Zfish   247  246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	23/67 (34%)
nkx6.2	NP_001129256.1	Homeodomain	150..208	CDD:459649	23/57 (40%)