Protein Alignment ind and hoxd1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001016678.1
• Gene: hoxd1 / 549432
• XenbaseID: XB-GENE-482731
• Length: 301
• Species: Xenopus tropicalis
• Alignment Length: 342
• Identity: 94/342 - (27%)
• Similarity: 127/342 - (37%)
• Gaps: 133/342 - (38%)

  Fly    56 VGSYL----------FSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPH--VSSSPGSLYHP 108
            :.|||          ||....:..|:....|.:..:.|          .||.  |...|||:.|.
 Frog     1 MNSYLEYTSCGDVVAFSPKFCRSDQRNMTLQPYPGSGA----------DHPFMPVGGVPGSVAHQ 55

  Fly   109 YAQLFASKRKSSGFS--NYEGCYPSPPLS-------------------ANPNSQQLPPIHNLYGS 152
                 ||.:..:.::  :.:..|..||.|                   .......:|     |||
 Frog    56 -----ASHQSPALYAPCSLDVAYEPPPPSDYSFLHSSTDYDYYGSNHLVEETGGHIP-----YGS 110

  Fly   153 PVVGG----------------------------LPL------------PEPGSFCTSPSASSSAS 177
            .|..|                            .||            |.||::   |..:|.||
 Frog   111 SVFPGNGSYILNGQLSYRTLGEETQMAQIAQCKEPLEVYPGGNLQSISPSPGTY---PKPASPAS 172

  Fly   178 LDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSK--RIRTAFTSTQLL 240
            ..:.:.||..:.||          :.|.|:           |.::|..:|.  .:||.||:.||.
 Frog   173 DTHVSTFDWMKVKR----------NPPKKS-----------LQSEYGVASPPCTVRTNFTTKQLT 216

  Fly   241 ELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQAS 305
            |||:||..|.||:|.|||||||.|:|::.||||||||||:||||...|....|       ||.:.
 Frog   217 ELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGSLPN-------SPPSG 274

  Fly   306 PVS------PQVK-VHE 315
            |.|      |..| |||
 Frog   275 PASSICVKTPLSKSVHE 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	36/57 (63%)
hoxd1	NP_001016678.1	Antp-type hexapeptide. /evidence=ECO:0000255	178..183		2/4 (50%)
		Homeodomain	207..260	CDD:459649	36/52 (69%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	255..301		16/44 (36%)