Protein Alignment ind and Hoxb4

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 253
• Identity: 82/253 - (32%)
• Similarity: 101/253 - (39%)
• Gaps: 86/253 - (33%)

  Fly   101 SPGSLYHPYAQLFASKRKSSGF--------------SNYEGCY--------PSPPLSANPNSQQL 143
            |||.    ||   ..:|:.|||              ..|..|.        |.||....|.....
  Rat    34 SPGY----YA---GGQRRESGFQPEAAFGRRAPCTVQRYAACRDPGPPPPPPPPPPPPPPGLSPR 91

  Fly   144 PPIHNLYG---------SPVVGGLPLPEPGSFCTS----PSASSSASLDYTNNFDEP---QGKRF 192
            .|:.:..|         |.||...|.|.|   |..    ||.|.||.       .||   ...|.
  Rat    92 APVQSTAGALLPEPGQRSEVVSSSPPPPP---CAQNPLHPSPSHSAC-------KEPVVYPWMRK 146

  Fly   193 KHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRR 257
            .|.|:.:|      |::.|.|              ||.|||:|..|:||||:||.:|.||:|.||
  Rat   147 VHVSTVNP------NYAGGEP--------------KRSRTAYTRQQVLELEKEFHYNRYLTRRRR 191

  Fly   258 IEIANRLRLSEKQVKIWFQNRRVKQKK-----------GGSESPTFNLSTNSNGSPQA 304
            :|||:.|.|||:|:||||||||:|.||           ||:...........||.|.|
  Rat   192 VEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGPPGRPNGGPPA 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	34/51 (67%)
Hoxb4	NP_001094257.1	Homeobox	164..218	CDD:395001	34/53 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900