Protein Alignment ind and Hoxb5

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001178854.1
• Gene: Hoxb5 / 497987
• RGDID: 1562292
• Length: 269
• Species: Rattus norvegicus
• Alignment Length: 306
• Identity: 90/306 - (29%)
• Similarity: 125/306 - (40%)
• Gaps: 82/306 - (26%)

  Fly     4 SFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSL-GIQQ 67
            |:.::|.....|| ....:.|....||..:.:....|||            :.|||.::. |:..
  Rat     3 SYFVNSFSGRYPN-GPDYQLLNYGSGSSLSGSYRDPAAM------------HTGSYGYNYNGMDL 54

  Fly    68 QQQQQQQQQQHAAAAAAAAAAAAALQQHPHV--SSSPGSLYHPYAQLFASKRKSSGFSNYEGCYP 130
            ...:......|..|...::.|..|..|.|..  ::|..||..|     .|...::|.|:  |..|
  Rat    55 SVNRSSASSSHFGAVGESSRAFPASAQEPRFRQATSSCSLSSP-----ESLPCTNGDSH--GAKP 112

  Fly   131 SPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSAS---LDYTNNFDEPQGKRF 192
            |   :::|:.|..|                           |||||:   :|..:...||
  Rat   113 S---ASSPSDQATP---------------------------ASSSANFTEIDEASASSEP----- 142

  Fly   193 KHESSCSPNSSPLKNH--------SSGGPVEITPLINDY-----------ADSSKRIRTAFTSTQ 238
              |.:.|..|||....        |:..|...||.|..:           ....||.|||:|..|
  Rat   143 --EEAASQLSSPSLARAQPEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQ 205

  Fly   239 LLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            .||||:||..|.||:|.||||||:.|.|||:|:||||||||:|.||
  Rat   206 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	35/51 (69%)
Hoxb5	NP_001178854.1	PRK07003	<67..>171	CDD:235906	33/147 (22%)
		Homeobox	198..251	CDD:365835	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810