Protein Alignment ind and hbn

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Alignment Length: 238
• Identity: 60/238 - (25%)
• Similarity: 96/238 - (40%)
• Gaps: 61/238 - (25%)

  Fly    73 QQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFAS----KRKSSGFSNYEGCYPSPP 133
            |..|.|  .....|...|.:|:.|  .|.|.::| ...|:..:    ||..:         ||..
  Fly     8 QHHQHH--PIMPPAMRPAPVQESP--VSRPRAVY-SIDQILGNQHQIKRSDT---------PSEV 58

  Fly   134 LSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSC 198
            |..:|:......||:|:                     :|:|...::.::..:.|..:.:|.|..
  Fly    59 LITHPHHGHPHHIHHLH---------------------SSNSNGSNHLSHQQQQQHSQQQHHSQQ 102

  Fly   199 SPNSSPLK---------NHSSGG-----PVEITPLINDYADSS--------KRIRTAFTSTQLLE 241
            ......|:         .::.||     ..|::..:|:..|.|        :|.||.||:.||.:
  Fly   103 QQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQ 167

  Fly   242 LEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            |||.|....|.....|.::|.||.|||.:|::||||||.|.:|
  Fly   168 LERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	27/55 (49%)
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	27/55 (49%)