DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and Abd-B

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:435 Identity:103/435 - (23%)
Similarity:156/435 - (35%) Gaps:171/435 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDRPNLSQKKEK------LGSPG---------GSPTAAAAVAAAAML---PSIPM-------LPY 51
            |..|:|.|::::      ..||.         .:||..:....|.|.   |.:|:       ||.
  Fly    51 SAHPHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPA 115

  Fly    52 PASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAA-------LQQHPHVSSSPGSLYHPY 109
            |...          ||.|||||||||..|....|.|.:.|       .||..|::|       |:
  Fly   116 PQQQ----------QQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTS-------PH 163

  Fly   110 AQLFASKRK----SSGFSN-------YEGCYPSP---------PLSANPNSQ-----------QL 143
            .|....::.    :||.|:       .:....:|         ..|.:|:|.           ||
  Fly   164 HQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQL 228

  Fly   144 PPIH---------------------------------NLYGSPV-----VGGLPLPEP------- 163
            .|:|                                 ..|||..     :...|.||.       
  Fly   229 APLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQY 293

  Fly   164 --GSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNS----------------------SP 204
              .::....:.|::|:..|.|..:       :|.|:.:..|                      .|
  Fly   294 WGPNYRPDQTTSAAAAAAYMNEAE-------RHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYP 351

  Fly   205 LKNHSSG-----------GPVEITPLINDYAD--SSKRIRTAFTSTQLLELEREFSHNAYLSRLR 256
            .:|:||.           ||....|.::::..  |.::.|..::..|.||||:||..|||:|:.:
  Fly   352 SENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQK 416

  Fly   257 RIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGS 301
            |.|:|..|:|:|:||||||||||:|.||......  |...|:|.|
  Fly   417 RWELARNLQLTERQVKIWFQNRRMKNKKNSQRQA--NQQNNNNNS 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 29/51 (57%)
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439755
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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